REDalign: accurate RNA structural alignment using residual encoder-decoder network

REDalign: accurate RNA structural alignment using residual encoder-decoder network

Abstract Background RNA secondary structural alignment serves as a foundational procedure in identifying conserved structural motifs among RNA sequences, crucially advancing our understanding of novel RNAs via comparative genomic analysis. While various computational strategies for RNA structural al...

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Bibliographic Details
Main Authors: Chun-Chi Chen, Yi-Ming Chan, Hyundoo Jeong
Format: Article
Language:English
Published: BMC 2024-11-01
Series:BMC Bioinformatics
Subjects:
RNA secondary structure
Structural alignment
Pseudoknot structure
Deep learning
Residual encoder decoder network
Online Access:https://doi.org/10.1186/s12859-024-05956-7
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https://doi.org/10.1186/s12859-024-05956-7

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