Atlantic cod growth model: Open source Python package for numerical growth experiments
In this article we introduce an open source tool that is used to study growth of Atlantic cod (Gadus morhua), an economically important fish species, in different temperature environments. It is a mechanistic physiology-based growth model that simulates growth in controlled laboratory experiments as...
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| Format: | Article |
| Language: | English |
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Elsevier
2025-05-01
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| Series: | SoftwareX |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352711025000809 |
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| _version_ | 1849326168361140224 |
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| author | Nadezhda Sokolova Anja Rohner Martin Butzin Hans-Otto Pörtner Gerrit Lohmann |
| author_facet | Nadezhda Sokolova Anja Rohner Martin Butzin Hans-Otto Pörtner Gerrit Lohmann |
| author_sort | Nadezhda Sokolova |
| collection | DOAJ |
| description | In this article we introduce an open source tool that is used to study growth of Atlantic cod (Gadus morhua), an economically important fish species, in different temperature environments. It is a mechanistic physiology-based growth model that simulates growth in controlled laboratory experiments as well as in an open sea environment. The model can be used by universities, industrial, and research institutes as a tool for testing research hypotheses, and studying temperature-dependent growth in fishes. |
| format | Article |
| id | doaj-art-c876c6da3de74ff7b51acf8c2fa792a4 |
| institution | Kabale University |
| issn | 2352-7110 |
| language | English |
| publishDate | 2025-05-01 |
| publisher | Elsevier |
| record_format | Article |
| series | SoftwareX |
| spelling | doaj-art-c876c6da3de74ff7b51acf8c2fa792a42025-08-20T03:48:13ZengElsevierSoftwareX2352-71102025-05-013010211310.1016/j.softx.2025.102113Atlantic cod growth model: Open source Python package for numerical growth experimentsNadezhda Sokolova0Anja Rohner1Martin Butzin2Hans-Otto Pörtner3Gerrit Lohmann4Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany; Corresponding author.Humboldt University of Berlin, Berlin, GermanyAlfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, GermanyAlfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany; University of Bremen, Bremen, GermanyAlfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany; University of Bremen, Bremen, GermanyIn this article we introduce an open source tool that is used to study growth of Atlantic cod (Gadus morhua), an economically important fish species, in different temperature environments. It is a mechanistic physiology-based growth model that simulates growth in controlled laboratory experiments as well as in an open sea environment. The model can be used by universities, industrial, and research institutes as a tool for testing research hypotheses, and studying temperature-dependent growth in fishes.http://www.sciencedirect.com/science/article/pii/S2352711025000809PythonFish growth modelTemperature-dependent growthEctothermsBiological dataAtlantic cod |
| spellingShingle | Nadezhda Sokolova Anja Rohner Martin Butzin Hans-Otto Pörtner Gerrit Lohmann Atlantic cod growth model: Open source Python package for numerical growth experiments SoftwareX Python Fish growth model Temperature-dependent growth Ectotherms Biological data Atlantic cod |
| title | Atlantic cod growth model: Open source Python package for numerical growth experiments |
| title_full | Atlantic cod growth model: Open source Python package for numerical growth experiments |
| title_fullStr | Atlantic cod growth model: Open source Python package for numerical growth experiments |
| title_full_unstemmed | Atlantic cod growth model: Open source Python package for numerical growth experiments |
| title_short | Atlantic cod growth model: Open source Python package for numerical growth experiments |
| title_sort | atlantic cod growth model open source python package for numerical growth experiments |
| topic | Python Fish growth model Temperature-dependent growth Ectotherms Biological data Atlantic cod |
| url | http://www.sciencedirect.com/science/article/pii/S2352711025000809 |
| work_keys_str_mv | AT nadezhdasokolova atlanticcodgrowthmodelopensourcepythonpackagefornumericalgrowthexperiments AT anjarohner atlanticcodgrowthmodelopensourcepythonpackagefornumericalgrowthexperiments AT martinbutzin atlanticcodgrowthmodelopensourcepythonpackagefornumericalgrowthexperiments AT hansottoportner atlanticcodgrowthmodelopensourcepythonpackagefornumericalgrowthexperiments AT gerritlohmann atlanticcodgrowthmodelopensourcepythonpackagefornumericalgrowthexperiments |