scPDA: denoising protein expression in droplet-based single-cell data

Abstract Droplet-based profiling techniques such as CITE-seq are often contaminated by technical noise. Current computational denoising methods have serious limitations, including a strong reliance on often-unavailable empty droplets or null controls and insufficient efficiency due to ignoring prote...

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Bibliographic Details
Main Authors: Ouyang Zhu, Jun Li
Format: Article
Language:English
Published: BMC 2025-07-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-025-03686-4
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