Assessing microbiome engraftment extent following fecal microbiota transplant with q2-fmt.
We present q2-fmt, a QIIME 2 plugin that provides diverse methods for assessing the extent of microbiome engraftment following fecal microbiota transplant. The methods implemented here were informed by a recent literature review on approaches for assessing FMT engraftment, and cover aspects of engra...
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| Main Authors: | Chloe Herman, Evan Bolyen, Anthony Simard, Liz Gehret, J Gregory Caporaso |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Public Library of Science (PLoS)
2025-07-01
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| Series: | PLoS Computational Biology |
| Online Access: | https://doi.org/10.1371/journal.pcbi.1013299 |
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