CacPred: a cascaded convolutional neural network for TF-DNA binding prediction

Abstract Background Transcription factors (TFs) regulate the genes’ expression by binding to DNA sequences. Aligned TFBSs of the same TF are seen as cis-regulatory motifs, and substantial computational efforts have been invested to find motifs. In recent years, convolutional neural networks (CNNs) h...

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Bibliographic Details
Main Authors: Shuangquan Zhang, Anjun Ma, Xuping Xie, Zhichao Lian, Yan Wang
Format: Article
Language:English
Published: BMC 2025-03-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-025-11399-y
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