The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants

The creation of the CRISPR–Cas system has provided unprecedented opportunities in plant genome research and crop genetic improvement. In recent years, this system has been continuously improved to meet human needs through the expansion and modification of Cas proteins, the diversification of targeti...

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Main Authors: Wanqing Tan, Zhiyuan Wang, Liezhao Liu
Format: Article
Language:English
Published: MDPI AG 2024-12-01
Series:Agriculture
Subjects:
Online Access:https://www.mdpi.com/2077-0472/15/1/29
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author Wanqing Tan
Zhiyuan Wang
Liezhao Liu
author_facet Wanqing Tan
Zhiyuan Wang
Liezhao Liu
author_sort Wanqing Tan
collection DOAJ
description The creation of the CRISPR–Cas system has provided unprecedented opportunities in plant genome research and crop genetic improvement. In recent years, this system has been continuously improved to meet human needs through the expansion and modification of Cas proteins, the diversification of targeting locations, and the optimization of CRISPR vectors. In this review, we systematically describe the Class II Cas proteins that have been used in plants, deactivated Cas9 (dCas9) and its role in transcriptional regulation, precision editing systems, Cas9 protein variants, as well as methods and examples of CRISPR–Cas systems targeting various regions with different breadths. In addition, we outline the optimization plans based on CRISPR constructs that can overcome the pleiotropy of genes or accelerate the generation of transgene-free plants and the applications of CRISPR systems in plant breeding practices. Finally, we discuss the theory and development of “CRISPR plus”, and the integrated application of existing systems in more species.
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series Agriculture
spelling doaj-art-90814bed0af5461098366a726bd26e932025-01-10T13:13:27ZengMDPI AGAgriculture2077-04722024-12-011512910.3390/agriculture15010029The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in PlantsWanqing Tan0Zhiyuan Wang1Liezhao Liu2Chongqing Engineering Research Center for Rapeseed, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, ChinaChongqing Engineering Research Center for Rapeseed, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, ChinaChongqing Engineering Research Center for Rapeseed, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, ChinaThe creation of the CRISPR–Cas system has provided unprecedented opportunities in plant genome research and crop genetic improvement. In recent years, this system has been continuously improved to meet human needs through the expansion and modification of Cas proteins, the diversification of targeting locations, and the optimization of CRISPR vectors. In this review, we systematically describe the Class II Cas proteins that have been used in plants, deactivated Cas9 (dCas9) and its role in transcriptional regulation, precision editing systems, Cas9 protein variants, as well as methods and examples of CRISPR–Cas systems targeting various regions with different breadths. In addition, we outline the optimization plans based on CRISPR constructs that can overcome the pleiotropy of genes or accelerate the generation of transgene-free plants and the applications of CRISPR systems in plant breeding practices. Finally, we discuss the theory and development of “CRISPR plus”, and the integrated application of existing systems in more species.https://www.mdpi.com/2077-0472/15/1/29CRISPR–Casprecise editingCRISPR screentransgene-freecrop improvement
spellingShingle Wanqing Tan
Zhiyuan Wang
Liezhao Liu
The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
Agriculture
CRISPR–Cas
precise editing
CRISPR screen
transgene-free
crop improvement
title The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
title_full The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
title_fullStr The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
title_full_unstemmed The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
title_short The Continuous Improvement of the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR-Associated Protein System Has Led to Its Highly Efficient Application in Plants
title_sort continuous improvement of the clustered regularly interspaced short palindromic repeats crispr crispr associated protein system has led to its highly efficient application in plants
topic CRISPR–Cas
precise editing
CRISPR screen
transgene-free
crop improvement
url https://www.mdpi.com/2077-0472/15/1/29
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