A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress

Abstract Rice production is gravely threatened by bacterial leaf streak (BLS). BLS prevention and control rely heavily on chemical pesticides, which contaminate the environment and endanger human health. Here, we evaluated the effects of inducer of plant resistance ZhiNengCong (ZNC), which is derive...

Full description

Saved in:
Bibliographic Details
Main Authors: Chongchong Lu, Yingzhe Yue, Baoyou Liu, Yanke Jiang, Zimeng Li, Muhammad Zunair Latif, Xiaoying Zhang, Dayin Chen, Lili Dai, Lingguang Kong, Qian Du, Ziyi Yin, Yang Li, Hansong Dong, Xinhua Ding
Format: Article
Language:English
Published: SpringerOpen 2025-07-01
Series:Rice
Subjects:
Online Access:https://doi.org/10.1186/s12284-025-00822-3
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1849235618789326848
author Chongchong Lu
Yingzhe Yue
Baoyou Liu
Yanke Jiang
Zimeng Li
Muhammad Zunair Latif
Xiaoying Zhang
Dayin Chen
Lili Dai
Lingguang Kong
Qian Du
Ziyi Yin
Yang Li
Hansong Dong
Xinhua Ding
author_facet Chongchong Lu
Yingzhe Yue
Baoyou Liu
Yanke Jiang
Zimeng Li
Muhammad Zunair Latif
Xiaoying Zhang
Dayin Chen
Lili Dai
Lingguang Kong
Qian Du
Ziyi Yin
Yang Li
Hansong Dong
Xinhua Ding
author_sort Chongchong Lu
collection DOAJ
description Abstract Rice production is gravely threatened by bacterial leaf streak (BLS). BLS prevention and control rely heavily on chemical pesticides, which contaminate the environment and endanger human health. Here, we evaluated the effects of inducer of plant resistance ZhiNengCong (ZNC), which is derived from endophytic fungi Paecilomyces variotii, the chemical pesticide dioctyl diethylenetriamine (DDL) and the antibiotic pesticide zhongshengmycin (ZSM) on grain size and quality of diseased- rice (DR). BLS significantly reduced the thousand-grain weight and seed setting rate of rice plants, which could be restored by ZNC rather than DDL or ZSM. Transcriptome and metabolomics profiling showed that ZNC increased the expression levels of resistance-, growth- and sugars, amino acids and lipid metabolism-related genes in DR leaves and restored the levels of carbohydrates, vitamins, nucleotides and amino acids in DR grains, which is better than DDL and ZSM. This study demonstrates that plant immune inducers are more effective than conventional pesticides in restoring DR yield and quality, which provides novel insights into the innovation of green biopesticides in sustainable crop production.
format Article
id doaj-art-71614a9ba1a34cf88e8a25d2042f58c1
institution Kabale University
issn 1939-8425
1939-8433
language English
publishDate 2025-07-01
publisher SpringerOpen
record_format Article
series Rice
spelling doaj-art-71614a9ba1a34cf88e8a25d2042f58c12025-08-20T04:02:44ZengSpringerOpenRice1939-84251939-84332025-07-0118111310.1186/s12284-025-00822-3A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease StressChongchong Lu0Yingzhe Yue1Baoyou Liu2Yanke Jiang3Zimeng Li4Muhammad Zunair Latif5Xiaoying Zhang6Dayin Chen7Lili Dai8Lingguang Kong9Qian Du10Ziyi Yin11Yang Li12Hansong Dong13Xinhua Ding14State Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityYantai Academy of Agricultural SciencesState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityShandong Pengbo Biotechnology Co., LtdShandong Pengbo Biotechnology Co., LtdShandong Pengbo Biotechnology Co., LtdState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityState Key Laboratory of Wheat Improvement, Shandong Agricultural UniversityAbstract Rice production is gravely threatened by bacterial leaf streak (BLS). BLS prevention and control rely heavily on chemical pesticides, which contaminate the environment and endanger human health. Here, we evaluated the effects of inducer of plant resistance ZhiNengCong (ZNC), which is derived from endophytic fungi Paecilomyces variotii, the chemical pesticide dioctyl diethylenetriamine (DDL) and the antibiotic pesticide zhongshengmycin (ZSM) on grain size and quality of diseased- rice (DR). BLS significantly reduced the thousand-grain weight and seed setting rate of rice plants, which could be restored by ZNC rather than DDL or ZSM. Transcriptome and metabolomics profiling showed that ZNC increased the expression levels of resistance-, growth- and sugars, amino acids and lipid metabolism-related genes in DR leaves and restored the levels of carbohydrates, vitamins, nucleotides and amino acids in DR grains, which is better than DDL and ZSM. This study demonstrates that plant immune inducers are more effective than conventional pesticides in restoring DR yield and quality, which provides novel insights into the innovation of green biopesticides in sustainable crop production.https://doi.org/10.1186/s12284-025-00822-3Natural plant immune inducersFood safetyCooking qualitySustainable crop productionBiopesticide
spellingShingle Chongchong Lu
Yingzhe Yue
Baoyou Liu
Yanke Jiang
Zimeng Li
Muhammad Zunair Latif
Xiaoying Zhang
Dayin Chen
Lili Dai
Lingguang Kong
Qian Du
Ziyi Yin
Yang Li
Hansong Dong
Xinhua Ding
A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
Rice
Natural plant immune inducers
Food safety
Cooking quality
Sustainable crop production
Biopesticide
title A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
title_full A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
title_fullStr A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
title_full_unstemmed A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
title_short A Multi-omics Approach Reveals the Effects of Bio- and Chemical- Pesticides on Rice Yield and Quality under Disease Stress
title_sort multi omics approach reveals the effects of bio and chemical pesticides on rice yield and quality under disease stress
topic Natural plant immune inducers
Food safety
Cooking quality
Sustainable crop production
Biopesticide
url https://doi.org/10.1186/s12284-025-00822-3
work_keys_str_mv AT chongchonglu amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yingzheyue amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT baoyouliu amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yankejiang amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT zimengli amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT muhammadzunairlatif amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT xiaoyingzhang amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT dayinchen amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT lilidai amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT lingguangkong amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT qiandu amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT ziyiyin amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yangli amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT hansongdong amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT xinhuading amultiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT chongchonglu multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yingzheyue multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT baoyouliu multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yankejiang multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT zimengli multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT muhammadzunairlatif multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT xiaoyingzhang multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT dayinchen multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT lilidai multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT lingguangkong multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT qiandu multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT ziyiyin multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT yangli multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT hansongdong multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress
AT xinhuading multiomicsapproachrevealstheeffectsofbioandchemicalpesticidesonriceyieldandqualityunderdiseasestress