Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments

Abstract Antimicrobial resistance (AMR) data from agroecosystems in low- and middle-income countries is limited. We surveyed chicken (n = 52) and pig (n = 47) farms in Kenya to understand AMR in animal-environment pathways. Using LC-MS/MS, we validated the methods for analyzing eight common antibiot...

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Main Authors: Fredrick Gudda, Dishon Muloi, Fredrick Nganga, Cynthia Nolari, Yanzheng Gao, Arshnee Moodley
Format: Article
Language:English
Published: Nature Portfolio 2024-12-01
Series:npj Antimicrobials and Resistance
Online Access:https://doi.org/10.1038/s44259-024-00071-2
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author Fredrick Gudda
Dishon Muloi
Fredrick Nganga
Cynthia Nolari
Yanzheng Gao
Arshnee Moodley
author_facet Fredrick Gudda
Dishon Muloi
Fredrick Nganga
Cynthia Nolari
Yanzheng Gao
Arshnee Moodley
author_sort Fredrick Gudda
collection DOAJ
description Abstract Antimicrobial resistance (AMR) data from agroecosystems in low- and middle-income countries is limited. We surveyed chicken (n = 52) and pig (n = 47) farms in Kenya to understand AMR in animal-environment pathways. Using LC-MS/MS, we validated the methods for analyzing eight common antibiotics and quantified the associated risks. Chicken compost (25.8%, n = 97/376) had the highest antibiotics prevalence, followed by pig manure-fertilized soils (23.1%, n = 83/360). The average antibiotic concentration was 63.4 µg/kg, which is below the environmentally relevant threshold (100 µg/kg), except for trimethoprim (221.4 µg/kg) among antibiotics and pig manure-fertilized soils (129.3 µg/kg) across sample types. Similarly, the average AMR risk quotient (RQ) was low (RQ < 0.1), except for trimethoprim and sulfamethoxazole (RQ ≥ 1). Ecotoxicity and AMR risks increased with flock size and the number of antibiotics used by pigs. Continuous environmental monitoring and large-scale studies on antibiotic contamination are crucial for evidence-based pollution control and the effective mitigation of environmental AMR.
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publishDate 2024-12-01
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series npj Antimicrobials and Resistance
spelling doaj-art-6077d42cef8b424fadbf2048b0e9da8c2025-01-05T12:47:51ZengNature Portfolionpj Antimicrobials and Resistance2731-87452024-12-012111310.1038/s44259-024-00071-2Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environmentsFredrick Gudda0Dishon Muloi1Fredrick Nganga2Cynthia Nolari3Yanzheng Gao4Arshnee Moodley5Animal and Human Health Programme, International Livestock Research InstituteAnimal and Human Health Programme, International Livestock Research InstituteAnimal and Human Health Programme, International Livestock Research InstituteAnimal and Human Health Programme, International Livestock Research InstituteInstitute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural UniversityAnimal and Human Health Programme, International Livestock Research InstituteAbstract Antimicrobial resistance (AMR) data from agroecosystems in low- and middle-income countries is limited. We surveyed chicken (n = 52) and pig (n = 47) farms in Kenya to understand AMR in animal-environment pathways. Using LC-MS/MS, we validated the methods for analyzing eight common antibiotics and quantified the associated risks. Chicken compost (25.8%, n = 97/376) had the highest antibiotics prevalence, followed by pig manure-fertilized soils (23.1%, n = 83/360). The average antibiotic concentration was 63.4 µg/kg, which is below the environmentally relevant threshold (100 µg/kg), except for trimethoprim (221.4 µg/kg) among antibiotics and pig manure-fertilized soils (129.3 µg/kg) across sample types. Similarly, the average AMR risk quotient (RQ) was low (RQ < 0.1), except for trimethoprim and sulfamethoxazole (RQ ≥ 1). Ecotoxicity and AMR risks increased with flock size and the number of antibiotics used by pigs. Continuous environmental monitoring and large-scale studies on antibiotic contamination are crucial for evidence-based pollution control and the effective mitigation of environmental AMR.https://doi.org/10.1038/s44259-024-00071-2
spellingShingle Fredrick Gudda
Dishon Muloi
Fredrick Nganga
Cynthia Nolari
Yanzheng Gao
Arshnee Moodley
Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
npj Antimicrobials and Resistance
title Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
title_full Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
title_fullStr Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
title_full_unstemmed Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
title_short Antibiotic ecotoxicity and resistance risks in resource-constrained chicken and pig farming environments
title_sort antibiotic ecotoxicity and resistance risks in resource constrained chicken and pig farming environments
url https://doi.org/10.1038/s44259-024-00071-2
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