Metagenome-validated combined amplicon sequencing and text mining-based annotations for simultaneous profiling of bacteria and fungi: vaginal microbiota and mycobiota in healthy women

Metagenome-validated combined amplicon sequencing and text mining-based annotations for simultaneous profiling of bacteria and fungi: vaginal microbiota and mycobiota in healthy women

Abstract Background Amplicon sequencing of kingdom-specific tags such as 16S rRNA gene for bacteria and internal transcribed spacer (ITS) region for fungi are widely used for investigating microbial communities. So far most human studies have focused on bacteria while studies on host-associated fung...

Full description

Saved in:
Bibliographic Details
Main Authors: Seppo Virtanen, Schahzad Saqib, Tinja Kanerva, Rebecka Ventin-Holmberg, Pekka Nieminen, Tiina Holster, Ilkka Kalliala, Anne Salonen
Format: Article
Language:English
Published: BMC 2024-12-01
Series:Microbiome
Subjects:
Microbiota
Mycobiota
Parallel sequencing
16S rRNA gene
ITS
Text mining
Online Access:https://doi.org/10.1186/s40168-024-01993-9
Tags: Add Tag
No Tags, Be the first to tag this record!

Internet

https://doi.org/10.1186/s40168-024-01993-9

Similar Items