Peptide nucleic acid (PNA) clamps reduce amplification of host chloroplast and mitochondria rRNA gene sequences and increase detected diversity in 16S rRNA gene profiling analysis of oak-associated microbiota
Abstract Background Acquiring representative bacterial 16S rRNA gene community profiles in plant microbiome studies can be challenging due to the excessive co-amplification of host chloroplast and mitochondrial rRNA gene sequences that reduce counts of plant-associated bacterial sequences. Peptide N...
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Main Authors: | Usman Hussain, Jim Downie, Amy Ellison, Sandra Denman, James McDonald, Marine C. Cambon |
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Format: | Article |
Language: | English |
Published: |
BMC
2025-01-01
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Series: | Environmental Microbiome |
Subjects: | |
Online Access: | https://doi.org/10.1186/s40793-025-00674-w |
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