Real-world enrollment for a prospective clinico-genomic database using a pragmatic technology-enabled platform by Alexia Exarchos, Ariel B. Bourla, Maneet Kaur, Katja Schulze, Sophia Maund, Yi Cao, Yihua Zhao, Elizabeth H. Williams, Sarah C. Gaffey, Richard Zuniga, Shaily Lakhanpal, Vladan Antic, Michelle Doral, Johanna Sy, Neal J. Meropol, Anne C. Chiang

“…Background: Discovery and incorporation of predictive and prognostic biomarkers enhance outcomes for patients with cancer. Clinico-genomic datasets, which retrospectively link real-world clinical data to tumor sequencing data, are important resources for biomarker research, which has historically relied on robust research infrastructures exclusive to large academic centers. …”
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CRISPR-Cas based precision genome editing: current advances and associated challenges in crop improvement and trait enhancement by Samanwaya Niraula, Rasik Khanal, Nischal Ghimire

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RNA binding motif 4 inhibits the replication of ebolavirus by directly targeting 3′-leader region of genomic RNA by Linjin Fan, Yulong Wang, Hongxin Huang, Zequn Wang, Chudan Liang, Xiaofeng Yang, Pengfei Ye, Jingyan Lin, Wendi Shi, Yuandong Zhou, Huijun Yan, Zhenyu Long, Zhongyi Wang, Linna Liu, Jun Qian

“…Ebola virus (EBOV) belongs to Filoviridae family possessing single-stranded negative-sense RNA genome, which is a serious threat to human health. …”
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Genomics reveal local skin immune response key to control sarcoptic mange in Iberian ibex (Capra pyrenaica) by Arián Ráez-Bravo, José Enrique Granados, José Espinosa, Lara Nonell, Emmanuel Serrano, Eulàlia Puigdecanet, Marta Bódalo, Jesús M. Pérez, Ramón C. Soriguer, Francisco Javier Cano-Manuel, Paulino Fandos, Jorge Ramón López-Olvera

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Cytosolic DNA composition is determined by genomic instability mechanism and regulates dendritic cell-mediated anti-tumor immunity by Shayla R. Mosley, Angie Chen, David N.W. Doell, Siwon Choi, Courtney Mowat, Felix Meier-Stephenson, Vanessa Meier-Stephenson, Kristi Baker

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Genome-Wide Association Mapping of Macronutrient Mineral Accumulation in Wheat (<i>Triticum aestivum</i> L.) Grain by Maha Aljabri, Mohamed El-Soda

“…One efficient way to guarantee nutritional security is through biofortification. A genome-wide association mapping approach was used to investigate the genetic basis of the differences in macronutrient mineral accumulation in wheat grains. …”
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Integration of Whole-Genome Sequencing with ddPCR Kit for Detection of Omicron Subvariants in Wastewater in the Upper Peninsula of Michigan by Michelle M. Jarvie, Thu N. T. Nguyen, Benjamin Southwell, Derek Wright

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High Resolution Comparative Genomic Hybridization Detects 7–8 Megabasepair Deletion in PCR Amplified DNA1 by Jacob Larsen, Anne Marie Ottesen, Maria Kirchhoff, Claes Lundsteen, Jørgen K. Larsen

“…We investigated if any change in spatial resolution of comparative genomic hybridization analysis could be detected when using DNA amplified by degenerate oligonucleotide primed PCR (DOP‐PCR) as opposed to the use of unamplified DNA. …”
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Differences in the genomic profiles of cell‐free DNA between plasma, sputum, urine, and tumor tissue in advanced NSCLC by Zhen Wu, Zhen Yang, Chun Sun Li, Wei Zhao, Zhi Xin Liang, Yu Dai, Qiang Zhu, Kai Ling Miao, Dong Hua Cui, Liang An Chen

“…However, the correlation between systematic determination of somatic genomic alterations in liquid biopsy and tumor biopsy still remained unclear, and the concordance rate between cell‐free DNA (cfDNA) and matched tumor tissue DNA needs to be increased. …”
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Mitochondrial Genome and Phylogenetic Analysis of the Narrownose Smooth-Hound Shark <i>Mustelus schmitti</i> Springer, 1939 by Walter Nisa-Castro-Neto, Paulo Guilherme Carniel Wagner, Diéssy Kipper, Vinicius Proença da Silveira, André Salvador Kazantzi Fonseca, Nilo Ikuta, Vagner Ricardo Lunge

“…The present study aimed to sequence the complete mitochondrial genome (mtDNA) of the endangered species <i>Mustelus schmitti</i> (narrownose smooth-hound shark) and to perform a phylogenetic analysis of the Triakidae family. …”
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American College of Medical Genetics and Genomics ACT Sheets Are a Vital Resource for State Newborn Screening Programs by Virginia Sack, Sara Etienne, Grace Beal, Sarah Bradley, Michele Caggana

“…The American College of Medical Genetics and Genomics (ACMG) and the National Coordinating Center for the Regional Genetics Networks (NCC)-developed ACT sheets are a vital resource for state newborn screening (NBS) programs. …”
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Establishing a Collaborative Genomic Repository for Adult Burn Survivors: A Burn Model System Feasibility Study by Stephen Sibbett, Jamie Oh, Gretchen Carrougher, Lara Muffley, Nathaniel Ashford, Maiya Pacleb, Samuel Mandell, Jeffrey Schneider, Steven Wolf, Barclay Stewart, Nicole S. Gibran

Subjects: “…genomics…”
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Association mapping for water use efficiency in soybean identifies previously reported and novel loci and permits genomic prediction by Siva K. Chamarthi, Siva K. Chamarthi, Larry C. Purcell, Felix B. Fritschi, Jeffery D. Ray, James R. Smith, Avjinder S. Kaler, C. Andy King, Jason D. Gillman

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Genome-wide DNA methylation and transcriptome sequencing analyses of lens tissue in an age-related mouse cataract model. by Yuzhu Hu, Dongmei Su, Yue Zhang, Yanjiang Fu, Sijia Li, Xiaoya Chen, Xiao Zhang, Shunfei Zheng, Xu Ma, Shanshan Hu

“…In conclusion, we confirmed the genome-wide DNA methylation pattern and gene expression profile of ARC based on the mouse cataract model with aged mice. …”
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Integrated genomic analysis to reduce chromosomal analysis for the diagnosis of pediatric hematologic malignancies: addressing the shortage of cytogenetic technologists by Dong Li, Sarah K. Tasian, Gerald Wertheim, Susan R. Rheingold, Kathrin M. Bernt, Haley Newman, Luanne Wainwright, Donna M. Wilmoth, Brian Thiel, Lea F. Surrey, Elizabeth Margolskee, Vinodh Pillai, Minjie Luo, Michele E. Paessler, Stephen P. Hunger, Marilyn M. Li, Yiming Zhong

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Genome-wide association study identifies four pan-ancestry loci for suicidal ideation in the Million Veteran Program. by Allison E Ashley-Koch, Nathan A Kimbrel, Xue J Qin, Jennifer H Lindquist, Melanie E Garrett, Michelle F Dennis, Lauren P Hair, Jennifer E Huffman, Daniel A Jacobson, Ravi K Madduri, Hilary Coon, Anna R Docherty, Jooeun Kang, Niamh Mullins, Douglas M Ruderfer, VA Million Veteran Program (MVP), MVP Suicide Exemplar Workgroup, International Suicide Genetics Consortium, Philip D Harvey, Benjamin H McMahon, David W Oslin, Elizabeth R Hauser, Michael A Hauser, Jean C Beckham

“…Ancestry-specific results were combined via meta-analysis to identify pan-ancestry loci. Four genome-wide significant (GWS) loci were identified in the pan-ancestry meta-analysis with loci on chromosomes 6 and 9 associated with suicide attempt in an independent sample. …”
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Uncovering the genetic basis of milk production traits in Mexican Holstein cattle based on individual markers and genomic windows. by José G Cortes-Hernández, Adriana García-Ruiz, Francisco Peñagaricano, Hugo H Montaldo, Felipe J Ruiz-López

“…The analysis included genotypic data on 7,713 cows and 577 sires, with information on 88,911 markers previously imputed and filtered by quality control. Genomic scans via the single-step genomic best linear unbiased prediction method were performed using BLUPF90 software. …”
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Genome analysis of colistin-resistant Salmonella isolates from human sources in Guizhou of southwestern China, 2019–2023 by Jingtong Wu, Yongxian Wen, Lv You, Xiaoyu Wei, Xiaoyu Wei, Junhua Wang, Ge Zhu, Shijun Li

Subjects: “…whole-genome sequence…”
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Genome Analysis of Anti-Phage Defense Systems and Defense Islands in <i>Stenotrophomonas maltophilia</i>: Preservation and Variability by Ghadeer Jdeed, Vera V. Morozova, Nina V. Tikunova

“…Pangenome analysis of the available <i>S. maltophilia</i> strains with complete genomes that were downloaded from GenBank, including five local genomes, indicated a wide set of 72 defense systems and subsystems that varied between the strains. …”
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Genomic analysis of IMP-8-producing Enterobacter hormaechei with a novel plasmid pK432-IMP by Jiao Feng, Zhiwei Song, Piaopiao Dai, Huimin Chen, Dakang Hu, Lianhua Yu, Jin Zhang, Xinhua Luo

“…The minimum inhibitory concentration (MIC) values were determined by VITEK2. The genome sequence of strain K432 was obtained and analysed. …”
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