Insights into the structural features and phylogenetic implications of the complete mitochondrial genome of Fasin rainbow fish (Melanotaenia fasinensis) by Huria Marnis, Khairul Syahputra, Kadarusman, Jadmiko Darmawan, Imam Civi Cartealy, Sekar Larashati, Wahyu Endra Kusuma, Erma Primanita Hayuningtyas, Bambang Iswanto, Ruzkiah Asaf, Admi Athirah, Arsad Tirta Subangkit, Dwi Wahyudha Wira, Sularto, Indrawati

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A genomic analysis of twinning rate and its relationship with other reproductive traits in Holstein-Friesian cattle by Brian W. Kirkpatrick, Donagh P. Berry

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Evaluating Genomic Selection in beef cattle: Insights from computer simulations using real SNP data by Lino César Ramírez Ayala, Jordi Leno-Colorado, Laura M. Zingaretti, Elies Ramón Gurrea, Yuliaxis Ramayo-Caldas, Miguel Pérez-Enciso

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Genome Analysis of Pass2 a Semi-Automated Database of Protein Alignments Organised as Structural Superfamilies by Anirban Bhaduri, V. Mallika, R. Sowdhamini

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Defective homologous recombination and genomic instability predict increased responsiveness to carbon ion radiotherapy in pancreatic cancer by Brock J. Sishc, Janapriya Saha, Elizabeth M. Alves, Lianghao Ding, Huiming Lu, Shih-Ya Wang, Katy L. Swancutt, James H. Nicholson, Angelica Facoetti, Arnold Pompos, Mario Ciocca, Todd A. Aguilera, Michael D. Story, Anthony J. Davis

“…Increased radiosensitivity was linked to impaired DNA double-strand break (DSB) repair, particularly in cell lines with deficiencies in the homologous recombination (HR) repair pathway and/or elevated genomic instability from replication stress. Furthermore, pretreatment with the HR inhibitor B02 significantly enhanced CIRT sensitivity in a radioresistant PDAC cell line when irradiated in the spread-out Bragg peak but not at the entry position of the beam. …”
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Protocol for transformation-free genome editing in plants using RNA virus vectors for CRISPR-Cas delivery by Huanhuan Lou, Haiying Xiang, Wanli Zeng, Jiarui Jiang, Jianduo Zhang, Li Xu, Chenglu Zhao, Qian Gao, Zhenghe Li

“…Here, we present a protocol for DNA-free plant genome editing using an engineered RNA virus vector for the transient delivery of CRISPR-Cas components. …”
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Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy by Edwin Ardiansyah, Anca-Lelia Riza, Sofiati Dian, Sofiati Dian, Ahmad Rizal Ganiem, Ahmad Rizal Ganiem, Bachti Alisjahbana, Bachti Alisjahbana, Todia P. Setiabudiawan, Arjan van Laarhoven, Reinout van Crevel, Vinod Kumar, Vinod Kumar

Subjects: “…whole genome sequencing…”
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A draft genome assembly of the reef-building coral Acropora hemprichii from the central Red Sea by Anna Fiesinger, Carol Buitrago-López, Abdoallah Sharaf, Anny Cárdenas, Christian R. Voolstra

“…We assembled the genome using 10x Chromium sequencing with subsequent scaffolding using a reference genome and Illumina short-read sequencing contigs. …”
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Complete chloroplast genome of eight Phaius (Orchidaceae) species from China: comparative analysis and phylogenetic relationship by Kaifeng Tao, Lu Tang, Yan Luo, Lu Li

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Integrating RNA-seq and population genomics to elucidate salt tolerance mechanisms in flax (Linum usitatissimum L.) by Yuan-Dong Li, Xiao Li, Xiao Li, Lei-Lei Zhu, Yang Yang, Dong-Liang Guo, Li-Qiong Xie, Li-Qiong Xie

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Comparative Genomic Analysis of an Apiotrichum cacaoliposimilis Strain Isolated from a Patient with Urinary Tract Infection by Wang Wei, Yi Jinping, Zhan Jiahuan, Luo Dong, Chen Qiang, Yu Shengming, Xie Ling, Chen Kaisen

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Prioritization of causal genes from genome-wide association studies by Bayesian data integration across loci. by Zeinab Mousavi, Marios Arvanitis, ThuyVy Duong, Jennifer A Brody, Alexis Battle, Nona Sotoodehnia, Ali Shojaie, Dan E Arking, Joel S Bader

“…<h4>Motivation</h4>Genome-wide association studies (GWAS) have identified genetic variants, usually single-nucleotide polymorphisms (SNPs), associated with human traits, including disease and disease risk. …”
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The genome sequence of Hoary Whitlowgrass, Draba incana L. [version 1; peer review: 2 approved] by Markus Ruhsam

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First Complete Genome Sequence Resource of a Potyvirus lactucae Isolate from the United States of America by Kishorekumar Reddy, Divya Kunda, Robert L. Gilbertson, Karen A. McDonald, Somen Nandi, Mysore R. Sudarshana

“…The genome of LMV-R consists of 10,080 nucleotides and shares the highest nucleotide identity with LMV isolate CL208 from Chile (97.2%) (GenBank accession KJ161176.1). …”
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Comparative Evaluation of Intron Prediction Methods and Detection of Plant Genome Annotation Using Intron Length Distributions by Long Yang, Hwan-Gue Cho

“…Genomics & Informatics…”
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Whole genome sequencing and antimicrobial resistance among clinical isolates of Shigella sonnei in Addis Ababa, Ethiopia by Basha Ayele, Adane Mihret, Zeleke Mekonnen, Tesfaye Sisay Tessema, Kalkidan Melaku, Maeruf Fetu Nassir, Abaysew Ayele, Dawit Hailu Alemayehu, Getenet Beyene

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IVAG: An Integrative Visualization Application for Various Types of Genomic Data Based on R-Shiny and the Docker Platform by Tae-Rim Lee, Jin Mo Ahn, Gyuhee Kim, Sangsoo Kim

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Identification of nonsense variants in the genomes of 15 Murciano-Granadina bucks and analysis of their segregation in parent-offspring trios by Ke Wang, María Gracia Luigi-Sierra, Anna Castelló, Taina Figueiredo-Cardoso, Anna Mercadé, Amparo Martínez, Juan Vicente Delgado, Javier Fernández Álvarez, Antonia Noce, Mingjing Wang, Jordi Jordana, Marcel Amills

“…The occurrence of such variants in the genomes of livestock species is modulated by multiple demographic and selective factors. …”
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A Novel and Rapid Selective Viral Genome Amplification and Sequencing Method for African Swine Fever Virus by Matthias Licheri, Manon Flore Licheri, Kemal Mehinagic, Nicolas Ruggli, Ronald Dijkman

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A whole‐genome scan for Artemisinin cytotoxicity reveals a novel therapy for human brain tumors by Jasmin Taubenschmid‐Stowers, Michael Orthofer, Anna Laemmerer, Christian Krauditsch, Marianna Rózsová, Christian Studer, Daniela Lötsch, Johannes Gojo, Lisa Gabler, Matheus Dyczynski, Thomas Efferth, Astrid Hagelkruys, Georg Widhalm, Andreas Peyrl, Sabine Spiegl‐Kreinecker, Dominic Hoepfner, Shan Bian, Walter Berger, Juergen A Knoblich, Ulrich Elling, Moritz Horn, Josef M Penninger

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