Genome-wide identification and gene expression pattern analysis of the glycoside hydrolase family 1 in Fagopyrum tataricum by Haizhu Yang, Xin Yao, Weijiao Wu, Ailing He, Chao Ma, Sanwei Yang, Jingjun Ruan

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The complete mitochondrial genome of Phyllobrotica signata (Mannerheim, 1825) (Coleoptera: Chrysomelidae: Galerucinae): characterization and phylogenetic implications by Xiao-Xuan Yu, Xu Jin, Xiao-Ling Lin, Li-Na Liu, Rui-E Nie

“…The results supported that P. signata and P. quadrimaculata were sister groups. The mitochondrial genome of P. signata will provide valuable genetic information for exploring the phylogenetic relationships in the family Chrysomelidae.…”
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Correction: Prognostic impact of donor mitochondrial genomic variants in myelodysplastic neoplasms after stem-cell transplantation by Jing Dong, Shahram Arsang-Jang, Tao Zhang, Zhongyuan Chen, Yung-Tsi Bolon, Stephen Spellman, Raul Urrutia, Paul Auer, Wael Saber

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Cross-ancestry meta-genome-wide association studies provide insights to the understanding of semen traits in pigs by H. Cheng, Z.Y. Zhang, H. Han, R. Wei, W. Zhao, Y.C. Sun, B.B. Xu, X.L. Hou, J.L. Wang, Y.Q. He, Y. Fu, Q.S. Wang, Y.C. Pan, Z. Zhang, Z. Wang

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Statistical examination of shared loci in neuropsychiatric diseases using genome-wide association study summary statistics by Thomas P Spargo, Lachlan Gilchrist, Guy P Hunt, Richard JB Dobson, Petroula Proitsi, Ammar Al-Chalabi, Oliver Pain, Alfredo Iacoangeli

“…Genomic regions with significant ‘local’ genetic correlations can be investigated further using state-of-the-art methodologies for statistical fine-mapping and variant colocalisation. …”
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MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes by Néron, Bertrand, Denise, Rémi, Coluzzi, Charles, Touchon, Marie, Rocha, Eduardo P.C., Abby, Sophie S.

“…Complex cellular functions are usually encoded by a set of genes in one or a few organized genetic loci in microbial genomes. Macromolecular System Finder (MacSyFinder) is a program that uses these properties to model and then annotate cellular functions in microbial genomes. …”
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Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii by Richard Olumakaiye, Christophe Corre, Fabrizio Alberti

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Genomic Differences and Mutations in Epidemic Orf Virus and Vaccine Strains: Implications for Improving Orf Virus Vaccines by Dengshuai Zhao, Yaoxu Shi, Miaomiao Zhang, Ping Li, Yuanhang Zhang, Tianyu Wang, Dixi Yu, Keshan Zhang

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Elucidating metabolic pathways through genomic analysis in highly heavy metal-resistant Halobacterium salinarum strains by Houda Baati, Mariem Siala, Souad Benali, Chafai Azri, Christopher Dunlap, Rosa María Martínez-Espinosa, Mohamed Trigui

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Comparative chloroplast genome analysis of Ardisia (Myrsinoideae, Primulaceae) in China and implications for phylogenetic relationships and adaptive evolution by Jin Zhang, Yangyang Ning, Jingjian Li, Yongbiao Deng, LiSheng Wang, Shizhong Mao, Bo Zhao

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Whole-Genome Metagenomic Analysis of Functional Profiles in the Fecal Microbiome of Farmed Sows with Different Reproductive Performances by Hiroto Miura, Takamitsu Tsukahara, Ryo Inoue

“…To understand how the gut microbiota affect the reproductive performances of sows, we conducted a whole-genome metagenomic analysis on the fecal microbial functional profiles of sows with high and low reproductive performances. …”
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2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador. by Luis E Hernandez-Castro, Marta Paterno, Anita G Villacís, Björn Andersson, Jaime A Costales, Michele De Noia, Sofía Ocaña-Mayorga, Cesar A Yumiseva, Mario J Grijalva, Martin S Llewellyn

“…Here we assess the effectiveness of three different 2b restriction site-associated DNA (2b-RAD) genotyping strategies in R. ecuadoriensis to provide sufficient genomic resolution to tease apart microevolutionary processes and undertake some pilot population genomic analyses.…”
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A scalable tool for analyzing genomic variants of humans using knowledge graphs and graph machine learning by Shivika Prasanna, Ajay Kumar, Deepthi Rao, Eduardo J. Simoes, Praveen Rao

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Characterization of the Complete Mitochondrial Genome of Pleurogenoides japonicus (Digenea, Pleurogenidae): Comparison With the Members of Microphalloidea and Phylogenetic Implications by Jun‐Feng Gao, Tian‐Shuai Ma, Mei‐Ru Hou, Qi An, Xue‐Wei Liu, Xin‐Hui Zhang, Jia‐Wen Wang, Lu Zhou, Xue Wang, Xue Bai, Chen‐Long Jiao, Zhuo Lan, Hong‐Yu Qiu, Chun‐Ren Wang

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Mapping genomic regions for reproductive stage drought tolerance in rice from exotic landrace-derived population by Challa Venkateshwarlu, Challa Venkateshwarlu, Paresh Chandra Kole, Arun Kumar Singh, Pronob J. Paul, Pallavi Sinha, Vikas Kumar Singh, Arvind Kumar

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Chromosome-level genome assembly of black carp Mylopharyngodon piceus using Nanopore and Hi-C technologies by Yuxuan Zhang, Yanwen Shao, Xudong Liu, Liang Zhong, Zhaoyan Zhong, Weiwei Zeng, Jiping Zhang, Wenlong Cai, Runsheng Li

“…The genome was anchored onto 24 chromosomes by Hi-C technology. …”
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Protocol to Identify Unknown Flanking DNA Using Partially Overlapping Primer-based PCR for Genome Walking by Mengya Jia, Dongqin Ding, Xiaohua Liu, Haixing Li

“…Genome walking is a popular molecular technique for accessing unknown flanking DNAs, which has been widely used in biology-related fields. …”
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Complete Circularized Genome Resources for Xylella fastidiosa subsp. sandyi Strains CO33 and CFBP8478 by María Pilar Velasco-Amo, Luis F. Arias-Giraldo, Miguel Román-Écija, Annalisa Giampetruzzi, Maria Saponari, Blanca B. Landa

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Genome-wide association study of myofiber type composition traits in a yellow-feather broiler population by Chengyu Fan, Yanju Shan, Ming Zhang, Yunjie Tu, Gaige Ji, Xiaojun Ju, Jingting Shu, Yifan Liu

Subjects: “…Genome-wide association study…”
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Downstream transcription promotes human recurrent CNV associated AT-rich sequence mediated genome rearrangements in yeast by Feng-Yun Xie, Xiao-Guohui Zhang, Juan Chen, Xin Xu, Sen Li, Tian-Jin Xia, Lei-Ning Chen, Shen Yin, Xiang-Hong Ou, Jun-Yu Ma

“…When human 16p11.2 or 22q11.2 recurrent copy number variant (reCNV) associated AT-rich sequence was inserted upstream GAL1 promoter in yeast genome, we found that downstream transcription could promote AT-rich forming cruciform structure and mediate gross genome rearrangements. …”
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