-
21
Fixation Probabilities of Evolutionary Graphs Based on the Positions of New Appearing Mutants
Published 2014-01-01“…Evolutionary graph theory is a nice measure to implement evolutionary dynamics on spatial structures of populations. …”
Get full text
Article -
22
A more significant role for insertion sequences in large-scale rearrangements in bacterial genomes
Published 2025-01-01Get full text
Article -
23
Letter to the editors
Published 2007-07-01“…Our paper Evolutionary dynamics of prey-predator systems with Holling type IIfunctional response, recently published in MBE (pp. 221-237, vol. 4, 2007), heavilydraws on earlier work by Michael Doebeli and Ulf Dieckmann:  Doebeli, M & Dieckmann, U. (2000). …”
Get full text
Article -
24
Natural and artificial interaction. Symbiotic processes between science, art and design
Published 2022-06-01“… The contribution will focus on how the concept of ‘living’ in the contemporary vision of design, with regard to vegetation, influences design culture, a concept constantly faced with the environmental context through practices of imitation of the logic of natural world interpretation of its evolutionary dynamics, the transformation of its elements and, more recently, with activities that investigate the fragile relationship and coexistence with man, to raise awareness of conscious behaviour. …”
Get full text
Article -
25
Single-Cell Sequencing in Cancer: Recent Applications to Immunogenomics and Multi-omics Tools
Published 2018-12-01“…Applied to cancers, these single-cell multi-omics methods bypass previous limitations on data resolution and have enabled a more nuanced understanding of the evolutionary dynamics of tumor progression, immune evasion, metastasis, and treatment resistance. …”
Get full text
Article -
26
Pharmacodynamics of interspecies interactions in polymicrobial infections
Published 2025-01-01“…Understanding the complex eco-evolutionary dynamics of PMIs and their impact on antimicrobial treatment response represents a step towards developing improved treatment strategies for PMIs. …”
Get full text
Article -
27
New technologies for future living. A proposal for 2100s Milan
Published 2020-12-01“…Evolutionary dynamics and the current environmental, social and economic emergencies envisage new urban visions requiring designers to shift the reference time’s horizon towards long-period scenarios. …”
Get full text
Article -
28
Paradigm shifters: tricksters and cultural science
Published 2010-12-01“…The disciplinary purpose of the paper is to try to bridge two otherwise disconnected domains – cultural studies and evolutionary economics – by showing that the traditional methods of the humanities (e.g. anthropological, textual and historical analysis) have explanatory force in the context of economic actions and complex-system evolutionary dynamics. The objective is to understand creative innovation as a general cultural attribute rather than one restricted only to accredited experts such as artists; thus to theorise creativity as a form of emergence for dynamic adaptive systems. …”
Get full text
Article -
29
Evolutionary Network Games: Equilibria from Imitation and Best Response Dynamics
Published 2017-01-01“…We consider games of strategic substitutes and complements on networks and introduce two evolutionary dynamics in order to refine their multiplicity of equilibria. …”
Get full text
Article -
30
Abundant repressor binding sites in human enhancers are associated with the fine-tuning of gene regulation
Published 2025-01-01“…Our work reveals modulated enhancer activity and adaptable gene regulation through the evolutionary dynamics of TF binding sites.…”
Get full text
Article -
31
A multiscale model of the bone marrow and hematopoiesis
Published 2011-03-01“…Our goal is the development of a spatially-explicit in silico model of the bone marrow to understand both its normal function and the evolutionary dynamics that govern the emergence of bone marrow malignancy.Here we introduce a multiscale computational model of the bone marrow that incorporates three distinct spatial scales, cell, hematopoietic subunit, whole marrow.Our results, using parameter estimates from literature, recapitulates normal bone marrow function and suggest an explanation for the fractal-like structure of trabeculae and sinuses in the marrow, which would be an optimization of the hematopoietic function in order to maximize the number of mature blood cells produced daily within the volumetric restrictions of the marrow.…”
Get full text
Article -
32
The Interplay Between Viral Infection and Cell Death: A Ping-Pong Effect
Published 2025-01-01“…This study emphasizes the importance of investigating the mechanisms by which viruses control the host’s PCD machinery to gain insight into the evolutionary dynamics of host-pathogen interactions and to develop new approaches for predicting and managing viral threats. …”
Get full text
Article -
33
Differential impact of sickle cell trait on symptomatic and asymptomatic malaria
Published 2012-09-01“…To examine the differential impact of the sickle cell trait on symptomatic and asymptomatic malaria, we developed a mathematical model of malaria transmission that incorporates the evolutionary dynamics of $S$-gene frequency. Our model indicates that the fitness of sickle cell trait is likely to increase with the proportion of symptomatic malaria infections. …”
Get full text
Article -
34
Short tandem repeats delineate gene bodies across eukaryotes
Published 2024-12-01“…These results suggest that the hypermutability inherent to STRs is canalized along the genome sequence and contributes to regulatory and eco-evolutionary dynamics in all eukaryotes.…”
Get full text
Article -
35
Evolution of infectious diseases induced by epidemic prevention publicity and interaction between heterogeneous strains
Published 2024-08-01“…Thus, we first establish an evolutionary dynamics Susceptible-Infected- Recovered (SIR) model which considers the interaction between heterogeneous strains. …”
Get full text
Article -
36
Evolution of parasite transmission dispersion
Published 2025-01-01“…We develop a mathematical model using a Price equation framework to address this question that follows the epidemiological and evolutionary dynamics of a general host–parasite system. …”
Get full text
Article -
37
Agent-Based Modeling and Simulation for the Bus-Corridor Problem in a Many-to-One Mass Transit System
Published 2014-01-01“…When each commuter has a limited memory, some fluctuations exist in the evolutionary dynamics of the system, and hence an ideal equilibrium can hardly be reached. …”
Get full text
Article -
38
Fitness landscapes of human microsatellites.
Published 2024-12-01“…The heterogeneity in fitness landscapes we report suggests that genome-scale analyses like those used to assess selection targeting single nucleotide variants run the risk of oversimplifying the evolutionary dynamics of microsatellites. Moreover, our fitness landscapes provide a valuable visualization of the selective dynamics navigated by microsatellites.…”
Get full text
Article -
39
The genetic architecture of local adaptation in a cline
Published 2023-02-01“…We also show that changing the fitness function relating trait to fitness has a strong impact on the overall evolutionary dynamics and resulting architecture. …”
Get full text
Article -
40
BIM Visual Analysis at Home and Abroad Based on Knowledge Graphs
Published 2025-01-01“…[Objective] Through visual analysis, an overview of the research status, the hot trends and evolutionary dynamics in the field of BIM (building information modeling) at home and abroad are comprehensively revealed. …”
Get full text
Article