A Narrative Review of Prognostic Gene Signatures in Oral Squamous Cell Carcinoma Using LASSO Cox Regression by Nur Fatinazwa Mohd Faizal, Saptarsi Shai, Bansi P. Savaliya, Lee Peng Karen-Ng, Rupa Kumari, Rahul Kumar, Vui King Vincent-Chong

“…It is essential to distinguish between cancers arising in the head and neck regions due to significant differences in their etiologies, treatment approaches, and prognoses. As the Cancer Genome Atlas (TCGA) dataset is available in HNSCC, the survival analysis prognosis of OSCC patients based on the TCGA dataset for discovering gene expression-based prognostic biomarkers is limited. …”
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A Novel Prognostic Signature Revealed the Interaction of Immune Cells in Tumor Microenvironment Based on Single-Cell RNA Sequencing for Lung Adenocarcinoma by Xing Jin, Zhengyang Hu, Qihai Sui, Mengnan Zhao, Jiaqi Liang, Zhenyu Liao, Yuansheng Zheng, Hao Wang, Yu Shi

“…The bioinformatics data of LUAD patients could be approached from The Cancer Genome Atlas (TCGA) portal. Weighted gene coexpression network analysis (WGCNA) and least absolute shrinkage and selection operator (LASSO) analyses were performed to construct a risk model. …”
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Evaluation of Radiological and Anatomical Features of Cervical Vertebrae in Adult Persian Cat by Peghah Derakhshi, Siamak Alizadeh, Mohammadreza Hosseinchi

“…The most important differences were as follows: the C3 and C7 had the lowest and highest spinous process height (SPH), respectively. The atlas had the highest transverse process width (TPW), which was significantly different with other cervical vertebrae (p ≤ 0.05). …”
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Do cash or digital payment modalities affect community health worker performance? – a case study of a remote refugee settlement in Western Uganda by Michael T Wagaba, David Musoke, Charles Opio, Arthur Bagonza, Juliet Aweko, Hajarah Nakitende, Alex Mulyowa, Michael Ediau, Peter Waiswa, Elizabeth Ekirapa-Kiracho

“…Qualitative data were analyzed thematically using Atlas.ti v9. Results CHWs performed better when paid cash than digital payments (t = 5.28; df = 246; p < 0.001). …”
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Prediction of the Binding to the Nuclear Factor NF-Kappa-B by Constituents from <i>Teucrium polium</i> L. Essential Oil by Renilson Castro de Barros, Renato Araújo da Costa, Nesrine Guenane, Boulanouar Bakchiche, Farouk Benaceur, Omer Elkiran, Suelem Daniella Pinho Farias, Vanessa Regina Silva Mota, Maria Fani Dolabela

“…The present study evaluates the components of <i>T. polium</i> essential oil cultivated in the Algerian Saharan Atlas. GC-MS identified the major components as fenchone (31.25%), 3-carene (15.77%), cis-limonene oxide (9.77%), and myrcene (9.15%). …”
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Actores y discursos en las políticas educativas de la Universidad Nacional de Agricultura de Honduras by Orlando David Murillo Lizardo

“…Los datos se recolectaron entre los años 2021 y 2022 mediante las técnicas de análisis de documentos y la entrevista semiestructurada y se examinaron a través de la técnica análisis cualitativo de contenido, esta última con el apoyo del Sofware ATLAS.ti, versión 8. Los resultados identifican múltiples actores y discursos que influyeron en las políticas educativas de la UNAG, tanto en la dimensión internacional —Organización de las Naciones Unidas para la Educación, la Ciencia y la Cultura -UNESCO-, Banco Mundial, Unión Europea, Consejo Superior Universitario Centroamericano (CSUCA), Conferencias Mundiales y Regionales de la Educación Superior— como nacional —Gobierno Central, Congreso Nacional, partidos políticos, Universidad Nacional Autónoma de Honduras (UNAH)—. …”
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Application of the OMERACT Grey-scale Ultrasound Scoring System for salivary glands in a single-centre cohort of patients with suspected Sjögren’s syndrome by Lene Terslev, Simon Krabbe, Viktoria Fana, Uffe M Dohn

“…Images of the four glands were scored 0–3 according to the scoring system and a consensus score was obtained using a developed ultrasound atlas.Results Of the 134 patients included in the analysis, 43 were diagnosed with primary SS (pSS) and all fulfilled the 2016 American College of Rheumatology (ACR)/EULAR classification criteria. …”
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Aporte de Trabajos Finales de Graduación a la Orientación vocacional, Universidad de Costa Rica (2012-2023) by Raquel Chaves Vargas, Natalia Granados Soto, Mauricio J. Navarro-Bulgarelli

“…Estos se procesaron mediante la codificación y categorización de datos usando el software ATLAS.ti, lo que permitió identificar las principales temáticas y conclusiones en el área. …”
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Symptom-based depression subtypes: brain dynamic specificity and its association with gene expression profiles by Qunjun Liang, Zhifeng Zhou, Shengli Chen, Shiwei Lin, Xiaoshan Lin, Ying Li, Yingli Zhang, Bo Peng, Gangqiang Hou, Yingwei Qiu

“…Finally, gene expression underlying the CCA model, along with its biological encoding process, performed using a postmortem gene expression atlas revealed distinct gene enrichments for different subtypes. …”
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Geological Modeling of the Senonian Aquifer in the Oued Guir Watershed (Southeast Morocco) by Messaoudi Badre, Kabiri Lahcen, El Ouali Mohamed, Ait Lahssaine Ismail, Kadiri Abdelhakim, Essafraoui Badre

“…The Oued Guir watershed in southeast Morocco stretches widely from the High Atlas in the north to the Hamadas in the south. This basin is characterized by an arid climate strongly influenced by continental conditions. …”
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Association of cortical macrostructural and microstructural changes with cognitive performance and gene expression in subcortical ischemic vascular disease patients with cognitive... by Jing Huang, Runtian Cheng, Xiaoshuang Liu, Li Chen, Tianyou Luo

“…Moreover, the associations between the significant neuroimaging values and the cognitive scores and gene expression values from Allen Human Brain Atlas database were evaluated using partial least squares regression and partial correlation analysis. …”
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YAP1 as a Novel Negative Biomarker of Immune Checkpoint Inhibitors for EGFR-Mutant Non-Small-Cell Lung Cancer by Ling-Chen Li, Xie-Wan Chen, Ling Fang, Chun-Li Jian, Yong-Xin Yu, Xing-Yun Liao, Jian-Guo Sun

“…All the clinical data of NSCLC were downloaded from Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) for GSE11969 and GSE72094. …”
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A comparative analysis of real and theoretical data in offshore wind energy generation by Fernando M. Camilo, Paulo J. Santos, Armando J. Pires

“…This study validates the accuracy of wind speed forecasts from three widely used sources – European Centre for Medium-Range Weather Forecasts (ERA5), Modern-Era Retrospective Analysis for Research and Applications, MERRA-2 (NASA), and the Wind Atlas – against actual power generation data from the WindFloat Atlantic offshore wind farm near Viana do Castelo, Portugal, over the years 2022 and 2023. …”
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Integrated bioinformatics and experimental analysis of CHAF1B as a novel biomarker and immunotherapy target in LUAD by Wei Du, Xiao-Wei Wu, Qing-Feng Li, Bing-Yu Zhang, Jing Wu, Ya-Ping Xu, Xue Yi

“…Using The Cancer Genome Atlas (TCGA) LUAD database, we analyzed the diagnostic and prognostic significance of CHAF1B and its association with immune infiltration and immunological checkpoints. …”
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Perceived barriers to reaching equity in effective access to diagnosis and treatment for women with breast cancer in Chile by Carla Campaña, Báltica Cabieses, Alexandra Obach, Francisca Vezzani

“…Interviews were transcribed, anonymized, and coded using ATLAS.Ti for deductive thematic analysis. Barriers to effective healthcare access were identified in all components of Tanahashi model. …”
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Web-Based Exercise and Nutrition Intervention to Improve Leg Muscle Strength and Physical Functioning in Older Adults: Pre-Post Pilot Study by Berber Gijsbertha Dorhout, Nick Wezenbeek, Lisette C P G M de Groot, Pol Grootswagers

“…Semistructured interviews were used to gather experiences of participants. Atlas.ti version 22 was used to analyze the interviews. …”
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Recommendations for the primary prevention of atherosclerotic cardiovascular disease in primary care: a systematic guideline review by Maren Bredehorst, Ana I. González-González, Lara Schürmann, Dennis Firmansyah, Christiane Muth, Jörg Haasenritter, Veronika van der Wardt, Svetlana Puzhko

“…Recommendations, with their strength and evidence level, were thematically coded and clustered around clinical questions using ATLAS.ti.ResultsWe included 26 CPGs from which we extracted 581 recommendations on risk assessment, non-pharmacological, and pharmacological interventions. …”
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Feature Selection in Cancer Classification: Utilizing Explainable Artificial Intelligence to Uncover Influential Genes in Machine Learning Models by Matheus Dalmolin, Karolayne S. Azevedo, Luísa C. de Souza, Caroline B. de Farias, Martina Lichtenfels, Marcelo A. C. Fernandes

“…Gene expression data from RNA-seq, extracted from The Cancer Genome Atlas (TCGA), were used to train ML models, including decision trees (DTs), random forest (RF), and XGBoost (XGB), which achieved accuracies of 98.69%, 99.82%, and 99.37%, respectively. …”
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Impact of Saharan dust on particulate matter characteristics in an urban and a natural locality in Central Europe by Jan Loskot, Daniel Jezbera, Martina Nalezinková, Adéla Holubová Šmejkalová, Danilo Fernandes, Jan Komárek

“…The transported dust originated from the northern/north-western Sahara – probably from the Atlas region – which was verified by a backward trajectory analysis of air masses using the HYSPLIT model.…”
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Changes in the Parietal Lobe Subregion Volume at Various Stages of Alzheimer’s Disease and the Role in Cognitively Normal and Mild Cognitive Impairment Conversion by Fang Lu, Qing Ma, Cailing Shi, Wenjun Yue

“…We measured the volume of the parietal subregion based on the Human Brainnetome Atlas (BNA-246) using voxel-based morphometry among individuals at various stages of AD and the progressive and stable individuals in CN and MCI. …”
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