Preliminary exploration of mRNA, lncRNA, and miRNA expressions in the bovine jejunum unveils novel aspects of Mycobacterium avium subspecies paratuberculosis infections by Yahui Gao, Jie Cao, Bo Han, Dongxiao Sun

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Combined analyses of mRNA and miRNA transcriptome reveal the molecular mechanisms of theca cells physiological differences in geese follicular selection stage by Xinyue Hu, Hengli Xie, Xi Zhang, Yueyue Lin, Shenqiang Hu, Jiwei Hu, Hua He, Liang Li, Hehe Liu, Jiwen Wang

Subjects: “…miRNA-seq…”
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Exploring RNA-Seq Data Analysis Through Visualization Techniques and Tools: A Systematic Review of Opportunities and Limitations for Clinical Applications by Farhana Manzoor, Cyruss A. Tsurgeon, Vibhuti Gupta

Subjects: “…RNA-seq…”
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MTFAP: a comprehensive platform for predicting and analyzing master transcription factors by Jianyuan Zhou, Haojie Yu, Chunhui Lou, Min Yang, Yanshang Li, Qian Yang, Shuhan Li, Chunwang Ji, Song Li, Shuang Wang, Haotian Cao, Xuecang Li, Lian Liu

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Robust single-nucleus RNA sequencing reveals depot-specific cell population dynamics in adipose tissue remodeling during obesity by Jisun So, Olivia Strobel, Jamie Wann, Kyungchan Kim, Avishek Paul, Dominic J Acri, Luke C Dabin, Jungsu Kim, Gang Peng, Hyun Cheol Roh

Subjects: “…snRNA-seq…”
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Protocol for direct cDNA cap analysis of gene expression for paired-end patterned flow cell sequencing by Diane Delobel, Hiromi Nishiyori-Sueki, Ilaria Nisoli, Hideya Kawaji, Pauline Robbe, Piero Carninci, Hazuki Takahashi

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Uncovering immune cell-associated genes in breast cancer: based on summary data-based Mendelian randomized analysis and colocalization study by Jingyang Liu, Wen Sun, Ning Li, Haibin Li, Lijuan Wu, Huan Yi, Jianguang Ji, Deqiang Zheng

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SCovid v2.0: a comprehensive resource to decipher the molecular characteristics across tissues in COVID-19 and other human coronaviruses by Zijun Zhu, Xinyu Chen, Guoyou He, Rui Yu, Chao Wang, Changlu Qi, Liang Cheng

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Characterization of Loss-of-Imprinting in Breast Cancer at the Cellular Level by Integrating Single-Cell Full-Length Transcriptome with Bulk RNA-Seq Data by Muhammad Talal Amin, Louis Coussement, Tim De Meyer

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Resolving Candidate Genes for Chicken Ovarian Transplantation through RNA-seq and WGCNA by Q Qin, R Liu, X Ding, Z Li, Y Zhang, X Yi, Y Zhao

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A Systematic Identification of RNA-Binding Proteins (RBPs) Driving Aberrant Splicing in Cancer by Cesar Lobato-Fernandez, Marian Gimeno, Ane San Martín, Ana Anorbe, Angel Rubio, Juan A. Ferrer-Bonsoms

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Investigation of Splicing Quantitative Trait Loci in by Wonseok Yoo, Sungkyu Kyung, Seonggyun Han, Sangsoo Kim

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The myometrial transcriptome changes in mares with endometrosis by Ewa Monika Drzewiecka, Tomasz Molcan, Agnieszka Sadowska, Katarzyna Piotrowska-Tomala, Magda Słyszewska, Graça Ferreira Dias, Dariusz Jan Skarżyński, Anna Szóstek-Mioduchowska

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Integrated TWAS, GWAS, and RNAseq results identify candidate genes associated with reproductive traits in cows by Sevda Hosseinzadeh, Seyed Abbas Rafat, Lingzhao Fang

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An improved bacterial single-cell RNA-seq reveals biofilm heterogeneity by Xiaodan Yan, Hebin Liao, Chenyi Wang, Chun Huang, Wei Zhang, Chunming Guo, Yingying Pu

Subjects: “…bacterial scRNA-seq…”
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Transcriptomic data of peach varieties with different chilling requirement levels by Weihan Zhang, Yayun Sun, Haiyan Li, Yuepeng Han, Baoxiong Wan, Liao Liao

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Protocol to boost the robustness and accuracy of spatial transcriptomics algorithms using ensemble techniques by Jiazhang Cai, Shushan Wu, Huimin Cheng, Wenxuan Zhong, Guo-Cheng Yuan, Ping Ma

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Unveiling alfalfa root rot resistance genes through an integrative GWAS and transcriptome study by Fei He, Ming Xu, Hao Liu, Yanchao Xu, Ruicai Long, Junmei Kang, Qingchuan Yang, Lin Chen

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NA-seq技术在野生动物研究中的应用 by 肖 慧 吴 尽 赵敏蝶 丁 新 刘学东

Subjects: “…RNA-seq…”
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Efficient small fragment sequencing of human, cattle, and bison miRNA, small RNA, or csRNA-seq libraries using AVITI by Anna L. McDonald, Andrew M. Boddicker, Marina I. Savenkova, Ian M. Brabb, Xiaodong Qi, Daniela D. Moré, Cristina W. Cunha, Junhua Zhao, Sascha H. Duttke

Subjects: “…Small RNA sequencing (sRNA-seq)…”
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