Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis
In this study, we present the complete mitochondrial genome of Rhinogobius shennongensis, sequenced using the Illumina HiSeq platform. The result is a circular mitogenome of 16,500 base pairs (bp) with a pronounced A + T nucleotide bias. Phylogenetic analysis was conducted using both Bayesian infere...
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| Language: | English |
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Taylor & Francis Group
2024-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2024.2429649 |
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| author | Xiao Jiang Chen Lin Song Xing Peng Han Quan Wang |
| author_facet | Xiao Jiang Chen Lin Song Xing Peng Han Quan Wang |
| author_sort | Xiao Jiang Chen |
| collection | DOAJ |
| description | In this study, we present the complete mitochondrial genome of Rhinogobius shennongensis, sequenced using the Illumina HiSeq platform. The result is a circular mitogenome of 16,500 base pairs (bp) with a pronounced A + T nucleotide bias. Phylogenetic analysis was conducted using both Bayesian inference (BI) and maximum-likelihood (ML) methods, utilizing the complete mitochondrial genomes of R. shennongensis and 19 additional Rhinogobius species. The analysis indicated a close mitochondrial relationship between R. maculagenys and R. shennongensis. This research not only enriches genetic resources but also supports phylogenetic studies within the genus Rhinogobius. To further clarify evolutionary dynamics, additional mitochondrial genome sequencing of other Rhinogobius species is essential. |
| format | Article |
| id | doaj-art-fa05d25c95d045e58214274c84bae05c |
| institution | Kabale University |
| issn | 2380-2359 |
| language | English |
| publishDate | 2024-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-fa05d25c95d045e58214274c84bae05c2024-12-23T06:12:38ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592024-11-019111554155810.1080/23802359.2024.2429649Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysisXiao Jiang Chen0Lin Song1Xing Peng Han2Quan Wang3College of Fisheries Science and Technology, Jiangsu Agri-animal Husbandry Vocational College, Taizhou, PR ChinaCollege of Fisheries Science and Technology, Jiangsu Agri-animal Husbandry Vocational College, Taizhou, PR ChinaCollege of Fisheries Science and Technology, Jiangsu Agri-animal Husbandry Vocational College, Taizhou, PR ChinaCollege of Fisheries Science and Technology, Jiangsu Agri-animal Husbandry Vocational College, Taizhou, PR ChinaIn this study, we present the complete mitochondrial genome of Rhinogobius shennongensis, sequenced using the Illumina HiSeq platform. The result is a circular mitogenome of 16,500 base pairs (bp) with a pronounced A + T nucleotide bias. Phylogenetic analysis was conducted using both Bayesian inference (BI) and maximum-likelihood (ML) methods, utilizing the complete mitochondrial genomes of R. shennongensis and 19 additional Rhinogobius species. The analysis indicated a close mitochondrial relationship between R. maculagenys and R. shennongensis. This research not only enriches genetic resources but also supports phylogenetic studies within the genus Rhinogobius. To further clarify evolutionary dynamics, additional mitochondrial genome sequencing of other Rhinogobius species is essential.https://www.tandfonline.com/doi/10.1080/23802359.2024.2429649Rhinogobius shennongensisRhinogobiusmitogenomephylogenetic analysis |
| spellingShingle | Xiao Jiang Chen Lin Song Xing Peng Han Quan Wang Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis Mitochondrial DNA. Part B. Resources Rhinogobius shennongensis Rhinogobius mitogenome phylogenetic analysis |
| title | Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis |
| title_full | Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis |
| title_fullStr | Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis |
| title_full_unstemmed | Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis |
| title_short | Complete mitochondrial genome of freshwater goby Rhinogobius shennongensis (Perciformes, Gobiidae): genome characterization and phylogenetic analysis |
| title_sort | complete mitochondrial genome of freshwater goby rhinogobius shennongensis perciformes gobiidae genome characterization and phylogenetic analysis |
| topic | Rhinogobius shennongensis Rhinogobius mitogenome phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2024.2429649 |
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