S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines

BackgroundThe unrelenting emergence of SARS-CoV-2 variants has significantly challenged the efficacy of existing COVID-19 vaccines. Enhancing the stability and immunogenicity of the spike protein is critical for improving vaccine performance and addressing variant-driven immune evasion.MethodsWe dev...

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Main Authors: Yong-Sik Bong, David Brown, Ezra Chung, Neeti Ananthaswamy, Renxiang Chen, Evan Lewoczko, William Sabbers, Athéna C. Patterson-Orazem, Zachary Dorsey, Yiqing Zou, Xue Yu, Jiening Liang, Jiaxi He, Steven Long, Dong Shen
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-01-01
Series:Frontiers in Immunology
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Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2024.1495561/full
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author Yong-Sik Bong
David Brown
Ezra Chung
Neeti Ananthaswamy
Renxiang Chen
Renxiang Chen
Evan Lewoczko
William Sabbers
Athéna C. Patterson-Orazem
Zachary Dorsey
Yiqing Zou
Xue Yu
Jiening Liang
Jiaxi He
Steven Long
Dong Shen
author_facet Yong-Sik Bong
David Brown
Ezra Chung
Neeti Ananthaswamy
Renxiang Chen
Renxiang Chen
Evan Lewoczko
William Sabbers
Athéna C. Patterson-Orazem
Zachary Dorsey
Yiqing Zou
Xue Yu
Jiening Liang
Jiaxi He
Steven Long
Dong Shen
author_sort Yong-Sik Bong
collection DOAJ
description BackgroundThe unrelenting emergence of SARS-CoV-2 variants has significantly challenged the efficacy of existing COVID-19 vaccines. Enhancing the stability and immunogenicity of the spike protein is critical for improving vaccine performance and addressing variant-driven immune evasion.MethodsWe developed an mRNA-based vaccine, RV-1730, encoding the Delta variant spike protein with the S6P mutation to enhance stability and immunogenicity. The vaccine’s immunogenicity and protective efficacy were evaluated in preclinical models, including monovalent (RV-1730) and bivalent (RV-1731) formulations targeting the Delta and BA.1 variants. Additionally, the effectiveness of RV-1730 as a heterologous booster following primary vaccination with BNT162b2 (Pfizer-BioNTech) and mRNA-1273 (Moderna-NIAID) was assessed.ResultsRV-1730 elicited significantly stronger B and T cell responses and more durable neutralizing antibodies compared to S2P-based vaccines. The bivalent RV-1731 vaccine demonstrated broad neutralizing activity against emerging variants, including XBB1.5 and JN.1. Importantly, RV-1730, when used as a heterologous booster following initial immunization with BNT162b2 or mRNA-1273, significantly enhanced neutralizing antibody titers against multiple variants, including Delta and Omicron. Both RV-1730 and RV-1731 provided superior protection in preclinical models, indicating enhanced efficacy due to the S6P mutation.ConclusionThe incorporation of the S6P mutation into the Delta variant spike protein significantly enhances the immunogenicity and efficacy of mRNA-based COVID-19 vaccines. The strong performance of RV-1730 as a heterologous booster and the broad-spectrum activity of the bivalent RV-1731 vaccine underscore their potential as versatile and effective vaccination strategies against SARS-CoV-2 and its evolving variants.
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spelling doaj-art-f0b8270a1e4f491b9152cc7d24c065f62025-01-03T06:47:08ZengFrontiers Media S.A.Frontiers in Immunology1664-32242025-01-011510.3389/fimmu.2024.14955611495561S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccinesYong-Sik Bong0David Brown1Ezra Chung2Neeti Ananthaswamy3Renxiang Chen4Renxiang Chen5Evan Lewoczko6William Sabbers7Athéna C. Patterson-Orazem8Zachary Dorsey9Yiqing Zou10Xue Yu11Jiening Liang12Jiaxi He13Steven Long14Dong Shen15RNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesGuangzhou RNAimmune, Ltd., Guangzhou, ChinaRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesGuangzhou RNAimmune, Ltd., Guangzhou, ChinaGuangzhou RNAimmune, Ltd., Guangzhou, ChinaGuangzhou RNAimmune, Ltd., Guangzhou, ChinaGuangzhou RNAimmune, Ltd., Guangzhou, ChinaRNAimmune, Inc., Germantown, MD, United StatesRNAimmune, Inc., Germantown, MD, United StatesBackgroundThe unrelenting emergence of SARS-CoV-2 variants has significantly challenged the efficacy of existing COVID-19 vaccines. Enhancing the stability and immunogenicity of the spike protein is critical for improving vaccine performance and addressing variant-driven immune evasion.MethodsWe developed an mRNA-based vaccine, RV-1730, encoding the Delta variant spike protein with the S6P mutation to enhance stability and immunogenicity. The vaccine’s immunogenicity and protective efficacy were evaluated in preclinical models, including monovalent (RV-1730) and bivalent (RV-1731) formulations targeting the Delta and BA.1 variants. Additionally, the effectiveness of RV-1730 as a heterologous booster following primary vaccination with BNT162b2 (Pfizer-BioNTech) and mRNA-1273 (Moderna-NIAID) was assessed.ResultsRV-1730 elicited significantly stronger B and T cell responses and more durable neutralizing antibodies compared to S2P-based vaccines. The bivalent RV-1731 vaccine demonstrated broad neutralizing activity against emerging variants, including XBB1.5 and JN.1. Importantly, RV-1730, when used as a heterologous booster following initial immunization with BNT162b2 or mRNA-1273, significantly enhanced neutralizing antibody titers against multiple variants, including Delta and Omicron. Both RV-1730 and RV-1731 provided superior protection in preclinical models, indicating enhanced efficacy due to the S6P mutation.ConclusionThe incorporation of the S6P mutation into the Delta variant spike protein significantly enhances the immunogenicity and efficacy of mRNA-based COVID-19 vaccines. The strong performance of RV-1730 as a heterologous booster and the broad-spectrum activity of the bivalent RV-1731 vaccine underscore their potential as versatile and effective vaccination strategies against SARS-CoV-2 and its evolving variants.https://www.frontiersin.org/articles/10.3389/fimmu.2024.1495561/fulllipid nanoparticles (LNPs)mRNA vaccinesSARS-CoV-2 spike proteinimmunogenicityneutralizing antibodiesDelta and Omicron variant
spellingShingle Yong-Sik Bong
David Brown
Ezra Chung
Neeti Ananthaswamy
Renxiang Chen
Renxiang Chen
Evan Lewoczko
William Sabbers
Athéna C. Patterson-Orazem
Zachary Dorsey
Yiqing Zou
Xue Yu
Jiening Liang
Jiaxi He
Steven Long
Dong Shen
S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
Frontiers in Immunology
lipid nanoparticles (LNPs)
mRNA vaccines
SARS-CoV-2 spike protein
immunogenicity
neutralizing antibodies
Delta and Omicron variant
title S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
title_full S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
title_fullStr S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
title_full_unstemmed S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
title_short S6P mutation in Delta and Omicron variant spike protein significantly enhances the efficacy of mRNA COVID-19 vaccines
title_sort s6p mutation in delta and omicron variant spike protein significantly enhances the efficacy of mrna covid 19 vaccines
topic lipid nanoparticles (LNPs)
mRNA vaccines
SARS-CoV-2 spike protein
immunogenicity
neutralizing antibodies
Delta and Omicron variant
url https://www.frontiersin.org/articles/10.3389/fimmu.2024.1495561/full
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