ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition.
<h4>Motivation</h4>Estimation of bacterial community composition from high-throughput sequenced 16S rRNA gene amplicons is a key task in microbial ecology. Since the sequence data from each sample typically consist of a large number of reads and are adversely impacted by different levels...
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| Main Authors: | David Koslicki, Saikat Chatterjee, Damon Shahrivar, Alan W Walker, Suzanna C Francis, Louise J Fraser, Mikko Vehkaperä, Yueheng Lan, Jukka Corander |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Public Library of Science (PLoS)
2015-01-01
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| Series: | PLoS ONE |
| Online Access: | https://doi.org/10.1371/journal.pone.0140644 |
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