Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest

Mitochondria are semi-autonomous organelles containing their own DNA (mtDNA), which is replicated independently of nuclear DNA (nDNA). While cell cycle arrest halts nDNA replication, mtDNA replication continues. In Saccharomyces cerevisiae, flow cytometry enables semi-quantitative estimation of mtDN...

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Main Authors: Elena Yu Potapenko, Nataliia D. Kashko, Dmitry A. Knorre
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-12-01
Series:Frontiers in Cell and Developmental Biology
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Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2024.1497652/full
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author Elena Yu Potapenko
Nataliia D. Kashko
Dmitry A. Knorre
author_facet Elena Yu Potapenko
Nataliia D. Kashko
Dmitry A. Knorre
author_sort Elena Yu Potapenko
collection DOAJ
description Mitochondria are semi-autonomous organelles containing their own DNA (mtDNA), which is replicated independently of nuclear DNA (nDNA). While cell cycle arrest halts nDNA replication, mtDNA replication continues. In Saccharomyces cerevisiae, flow cytometry enables semi-quantitative estimation of mtDNA levels by measuring the difference in signals between cells lacking mtDNA and those containing mtDNA. In this study, we used flow cytometry to investigate mtDNA accumulation in yeast cells under G1 and G2 phase cell cycle arrest conditions utilising thermosensitive mutants cdc4-3 and cdc15-2. In line with the previous studies, cell cycle arrest induced a several-fold accumulation of mtDNA in both mutants. The total DNA levels in arrested cells correlated with cell forward scattering, suggesting a relationship between individual cell mtDNA quantity and size. In cell cycle-arrested cells, we observed no correlation between cell size and intercellular mtDNA copy number variability. This implies that as cell size increases during arrest, the mtDNA content remains within a specific limited range for each size class. This observation suggests that mtDNA quantity control mechanisms can function in cell cycle-arrested cells.
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spelling doaj-art-bb75e8b15bbb459186df5b898b92c5e32024-12-16T06:18:37ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2024-12-011210.3389/fcell.2024.14976521497652Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrestElena Yu Potapenko0Nataliia D. Kashko1Dmitry A. Knorre2A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, RussiaFaculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, RussiaA. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, RussiaMitochondria are semi-autonomous organelles containing their own DNA (mtDNA), which is replicated independently of nuclear DNA (nDNA). While cell cycle arrest halts nDNA replication, mtDNA replication continues. In Saccharomyces cerevisiae, flow cytometry enables semi-quantitative estimation of mtDNA levels by measuring the difference in signals between cells lacking mtDNA and those containing mtDNA. In this study, we used flow cytometry to investigate mtDNA accumulation in yeast cells under G1 and G2 phase cell cycle arrest conditions utilising thermosensitive mutants cdc4-3 and cdc15-2. In line with the previous studies, cell cycle arrest induced a several-fold accumulation of mtDNA in both mutants. The total DNA levels in arrested cells correlated with cell forward scattering, suggesting a relationship between individual cell mtDNA quantity and size. In cell cycle-arrested cells, we observed no correlation between cell size and intercellular mtDNA copy number variability. This implies that as cell size increases during arrest, the mtDNA content remains within a specific limited range for each size class. This observation suggests that mtDNA quantity control mechanisms can function in cell cycle-arrested cells.https://www.frontiersin.org/articles/10.3389/fcell.2024.1497652/fullmtDNAyeastmtDNA copy number controlmtDNA copy numbercell cycle arrestcell cycle defect
spellingShingle Elena Yu Potapenko
Nataliia D. Kashko
Dmitry A. Knorre
Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
Frontiers in Cell and Developmental Biology
mtDNA
yeast
mtDNA copy number control
mtDNA copy number
cell cycle arrest
cell cycle defect
title Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
title_full Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
title_fullStr Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
title_full_unstemmed Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
title_short Flow-cytometry reveals mitochondrial DNA accumulation in Saccharomyces cerevisiae cells during cell cycle arrest
title_sort flow cytometry reveals mitochondrial dna accumulation in saccharomyces cerevisiae cells during cell cycle arrest
topic mtDNA
yeast
mtDNA copy number control
mtDNA copy number
cell cycle arrest
cell cycle defect
url https://www.frontiersin.org/articles/10.3389/fcell.2024.1497652/full
work_keys_str_mv AT elenayupotapenko flowcytometryrevealsmitochondrialdnaaccumulationinsaccharomycescerevisiaecellsduringcellcyclearrest
AT nataliiadkashko flowcytometryrevealsmitochondrialdnaaccumulationinsaccharomycescerevisiaecellsduringcellcyclearrest
AT dmitryaknorre flowcytometryrevealsmitochondrialdnaaccumulationinsaccharomycescerevisiaecellsduringcellcyclearrest