ChromatinHD connects single-cell DNA accessibility and conformation to gene expression through scale-adaptive machine learning
Abstract Gene regulation is inherently multiscale, but scale-adaptive machine learning methods that fully exploit this property in single-nucleus accessibility data are still lacking. Here, we develop ChromatinHD, a pair of scale-adaptive models that uses the raw accessibility data, without peak-cal...
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Main Authors: | Wouter Saelens, Olga Pushkarev, Bart Deplancke |
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Format: | Article |
Language: | English |
Published: |
Nature Portfolio
2025-01-01
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Series: | Nature Communications |
Online Access: | https://doi.org/10.1038/s41467-024-55447-9 |
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