Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy

Abstract UHRF1 maintains DNA methylation by recruiting DNA methyltransferases to chromatin. In mouse, these dynamics are potently antagonized by a natural UHRF1 inhibitory protein STELLA, while the comparable effects of its human ortholog are insufficiently characterized, especially in cancer cells....

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Main Authors: Wenjing Bai, Jinxin Xu, Wenbin Gu, Danyang Wang, Ying Cui, Weidong Rong, Xiaoan Du, Xiaoxia Li, Cuicui Xia, Qingqing Gan, Guantao He, Huahui Guo, Jinfeng Deng, Yuqiong Wu, Ray-Whay Chiu Yen, Srinivasan Yegnasubramanian, Scott B. Rothbart, Cheng Luo, Linping Wu, Jinsong Liu, Stephen B. Baylin, Xiangqian Kong
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-024-55481-7
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author Wenjing Bai
Jinxin Xu
Wenbin Gu
Danyang Wang
Ying Cui
Weidong Rong
Xiaoan Du
Xiaoxia Li
Cuicui Xia
Qingqing Gan
Guantao He
Huahui Guo
Jinfeng Deng
Yuqiong Wu
Ray-Whay Chiu Yen
Srinivasan Yegnasubramanian
Scott B. Rothbart
Cheng Luo
Linping Wu
Jinsong Liu
Stephen B. Baylin
Xiangqian Kong
author_facet Wenjing Bai
Jinxin Xu
Wenbin Gu
Danyang Wang
Ying Cui
Weidong Rong
Xiaoan Du
Xiaoxia Li
Cuicui Xia
Qingqing Gan
Guantao He
Huahui Guo
Jinfeng Deng
Yuqiong Wu
Ray-Whay Chiu Yen
Srinivasan Yegnasubramanian
Scott B. Rothbart
Cheng Luo
Linping Wu
Jinsong Liu
Stephen B. Baylin
Xiangqian Kong
author_sort Wenjing Bai
collection DOAJ
description Abstract UHRF1 maintains DNA methylation by recruiting DNA methyltransferases to chromatin. In mouse, these dynamics are potently antagonized by a natural UHRF1 inhibitory protein STELLA, while the comparable effects of its human ortholog are insufficiently characterized, especially in cancer cells. Herein, we demonstrate that human STELLA (hSTELLA) is inadequate, while mouse STELLA (mSTELLA) is fully proficient in inhibiting the abnormal DNA methylation and oncogenic functions of UHRF1 in human cancer cells. Structural studies reveal a region of low sequence homology between these STELLA orthologs that allows mSTELLA but not hSTELLA to bind tightly and cooperatively to the essential histone-binding, linked tandem Tudor domain and plant homeodomain (TTD-PHD) of UHRF1, thus mediating ortholog-specific UHRF1 inhibition. For translating these findings to cancer therapy, we use a lipid nanoparticle (LNP)-mediated mRNA delivery approach in which the short mSTELLA, but not hSTELLA regions are required to reverse cancer-specific DNA hypermethylation and impair colorectal cancer tumorigenicity.
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spelling doaj-art-b19436831a664ed7abb041269b3bacd52025-01-12T12:31:03ZengNature PortfolioNature Communications2041-17232025-01-0116112210.1038/s41467-024-55481-7Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapyWenjing Bai0Jinxin Xu1Wenbin Gu2Danyang Wang3Ying Cui4Weidong Rong5Xiaoan Du6Xiaoxia Li7Cuicui Xia8Qingqing Gan9Guantao He10Huahui Guo11Jinfeng Deng12Yuqiong Wu13Ray-Whay Chiu Yen14Srinivasan Yegnasubramanian15Scott B. Rothbart16Cheng Luo17Linping Wu18Jinsong Liu19Stephen B. Baylin20Xiangqian Kong21Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesState Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesGuangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesThe Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of MedicineGuangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesState Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesGuangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesState Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesGuangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesThe Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of MedicineThe Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of MedicineDepartment of Epigenetics, Van Andel InstituteState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of SciencesInstitute of Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesState Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesThe Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of MedicineGuangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, CAS Key Laboratory of Regenerative Biology, China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of SciencesAbstract UHRF1 maintains DNA methylation by recruiting DNA methyltransferases to chromatin. In mouse, these dynamics are potently antagonized by a natural UHRF1 inhibitory protein STELLA, while the comparable effects of its human ortholog are insufficiently characterized, especially in cancer cells. Herein, we demonstrate that human STELLA (hSTELLA) is inadequate, while mouse STELLA (mSTELLA) is fully proficient in inhibiting the abnormal DNA methylation and oncogenic functions of UHRF1 in human cancer cells. Structural studies reveal a region of low sequence homology between these STELLA orthologs that allows mSTELLA but not hSTELLA to bind tightly and cooperatively to the essential histone-binding, linked tandem Tudor domain and plant homeodomain (TTD-PHD) of UHRF1, thus mediating ortholog-specific UHRF1 inhibition. For translating these findings to cancer therapy, we use a lipid nanoparticle (LNP)-mediated mRNA delivery approach in which the short mSTELLA, but not hSTELLA regions are required to reverse cancer-specific DNA hypermethylation and impair colorectal cancer tumorigenicity.https://doi.org/10.1038/s41467-024-55481-7
spellingShingle Wenjing Bai
Jinxin Xu
Wenbin Gu
Danyang Wang
Ying Cui
Weidong Rong
Xiaoan Du
Xiaoxia Li
Cuicui Xia
Qingqing Gan
Guantao He
Huahui Guo
Jinfeng Deng
Yuqiong Wu
Ray-Whay Chiu Yen
Srinivasan Yegnasubramanian
Scott B. Rothbart
Cheng Luo
Linping Wu
Jinsong Liu
Stephen B. Baylin
Xiangqian Kong
Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
Nature Communications
title Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
title_full Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
title_fullStr Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
title_full_unstemmed Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
title_short Defining ortholog-specific UHRF1 inhibition by STELLA for cancer therapy
title_sort defining ortholog specific uhrf1 inhibition by stella for cancer therapy
url https://doi.org/10.1038/s41467-024-55481-7
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