Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand
Abstract Objectives Haloferax volcanii is an extreme halophile belonging to the Haloferacaceae family that thrives in hypersaline environments. This study presents the complete genome sequence of the H. volcanii strain PC0224 isolated from a Thai solar saltern. Genomic data will enhance our understa...
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| Format: | Article |
| Language: | English |
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BMC
2025-08-01
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| Series: | BMC Genomic Data |
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| Online Access: | https://doi.org/10.1186/s12863-025-01353-y |
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| author | Manassanan Phatcharaharikarn Pattarawan Ruangsuj Thunwarat Songngamsuk Parweenuch Santaweesuk Marut Tangwattanachuleeporn Kanokporn Srisucharitpanit Prapimpun Wongchitrat Montri Yasawong |
| author_facet | Manassanan Phatcharaharikarn Pattarawan Ruangsuj Thunwarat Songngamsuk Parweenuch Santaweesuk Marut Tangwattanachuleeporn Kanokporn Srisucharitpanit Prapimpun Wongchitrat Montri Yasawong |
| author_sort | Manassanan Phatcharaharikarn |
| collection | DOAJ |
| description | Abstract Objectives Haloferax volcanii is an extreme halophile belonging to the Haloferacaceae family that thrives in hypersaline environments. This study presents the complete genome sequence of the H. volcanii strain PC0224 isolated from a Thai solar saltern. Genomic data will enhance our understanding of circadian rhythm mechanisms and their evolutionary significance in extremophilic archaea. Data description The H. volcanii PC0224 genome comprises four circular sequences containing 3,773,977 bp and 66.16% GC content. Sequenced using Illumina and PacBio technologies and assembled with Hybracter, the genome contained 3,731 CDS, 6 rRNAs, 54 tRNAs, 2 ncRNAs, and 4 CRISPR arrays. This dataset enables the investigation of circadian rhythm regulatory systems and comparative genomic studies of temporal adaptation mechanisms in extremophilic archaea. |
| format | Article |
| id | doaj-art-a5bd6ceb226e4b89a4094f3166e8d25f |
| institution | Kabale University |
| issn | 2730-6844 |
| language | English |
| publishDate | 2025-08-01 |
| publisher | BMC |
| record_format | Article |
| series | BMC Genomic Data |
| spelling | doaj-art-a5bd6ceb226e4b89a4094f3166e8d25f2025-08-24T11:54:06ZengBMCBMC Genomic Data2730-68442025-08-012611410.1186/s12863-025-01353-yComplete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in ThailandManassanan Phatcharaharikarn0Pattarawan Ruangsuj1Thunwarat Songngamsuk2Parweenuch Santaweesuk3Marut Tangwattanachuleeporn4Kanokporn Srisucharitpanit5Prapimpun Wongchitrat6Montri Yasawong7Programme on Environmental Toxicology, Chulabhorn Graduate InstituteProgramme on Environmental Toxicology, Chulabhorn Graduate InstituteProgramme on Environmental Toxicology, Chulabhorn Graduate InstituteProgramme on Environmental Toxicology, Chulabhorn Graduate InstituteFaculty of Allied Health Sciences, Burapha UniversityFaculty of Allied Health Sciences, Burapha UniversityCenter for Research Innovation and Biomedical Informatics, Faculty of Medical Technology, Mahidol UniversityProgramme on Environmental Toxicology, Chulabhorn Graduate InstituteAbstract Objectives Haloferax volcanii is an extreme halophile belonging to the Haloferacaceae family that thrives in hypersaline environments. This study presents the complete genome sequence of the H. volcanii strain PC0224 isolated from a Thai solar saltern. Genomic data will enhance our understanding of circadian rhythm mechanisms and their evolutionary significance in extremophilic archaea. Data description The H. volcanii PC0224 genome comprises four circular sequences containing 3,773,977 bp and 66.16% GC content. Sequenced using Illumina and PacBio technologies and assembled with Hybracter, the genome contained 3,731 CDS, 6 rRNAs, 54 tRNAs, 2 ncRNAs, and 4 CRISPR arrays. This dataset enables the investigation of circadian rhythm regulatory systems and comparative genomic studies of temporal adaptation mechanisms in extremophilic archaea.https://doi.org/10.1186/s12863-025-01353-yHaloferax volcaniiClock geneCircadianCirACirBCirC |
| spellingShingle | Manassanan Phatcharaharikarn Pattarawan Ruangsuj Thunwarat Songngamsuk Parweenuch Santaweesuk Marut Tangwattanachuleeporn Kanokporn Srisucharitpanit Prapimpun Wongchitrat Montri Yasawong Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand BMC Genomic Data Haloferax volcanii Clock gene Circadian CirA CirB CirC |
| title | Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand |
| title_full | Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand |
| title_fullStr | Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand |
| title_full_unstemmed | Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand |
| title_short | Complete genome sequence of the halophilic archaeon Haloferax volcanii PC0224, isolated from a solar saltern in Thailand |
| title_sort | complete genome sequence of the halophilic archaeon haloferax volcanii pc0224 isolated from a solar saltern in thailand |
| topic | Haloferax volcanii Clock gene Circadian CirA CirB CirC |
| url | https://doi.org/10.1186/s12863-025-01353-y |
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