A fast in situ hybridization chain reaction method in Drosophila embryos and ovaries

The in situ hybridization chain reaction (isHCR) is a powerful method for visualizing mRNA in many species. We present a rapid isHCR method for Drosophila embryos and ovaries. Ethylene carbonate was added to the hybridization buffer to facilitate the hybridization reaction, and a modified short hair...

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Bibliographic Details
Main Authors: Kyohei Mikami, Yasuhiro Kozono, Masaki Masukawa, Satoru Kobayashi
Format: Article
Language:English
Published: Taylor & Francis Group 2025-12-01
Series:Fly
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Online Access:https://www.tandfonline.com/doi/10.1080/19336934.2024.2428499
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Summary:The in situ hybridization chain reaction (isHCR) is a powerful method for visualizing mRNA in many species. We present a rapid isHCR method for Drosophila embryos and ovaries. Ethylene carbonate was added to the hybridization buffer to facilitate the hybridization reaction, and a modified short hairpin DNA was used in the amplification reaction; these modifications decreased the RNA staining time from 3 days to 1 day. This method is compatible with immunohistochemistry and can detect multiple mRNAs. The proposed method could significantly reduce staining time for Drosophila researchers using isHCR.
ISSN:1933-6934
1933-6942