An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation

Abstract The scaffold protein AMBRA1, which participates in the autophagy pathway, also promotes CD4+ T cell differentiation to Tregs independent of autophagy through its interactor PP2A. Here we have investigated the role of AMBRA1 in CD8+ T cell differentiation to cytotoxic T cells (CTL). AMBRA1 d...

Full description

Saved in:
Bibliographic Details
Main Authors: Loredana Migliore, Valentina Cianfanelli, Fabrizia Zevolini, Monica Gesualdo, Leandro Marzuoli, Laura Patrussi, Cristina Ulivieri, Giuseppe Marotta, Francesco Cecconi, Francesca Finetti, Cosima T. Baldari
Format: Article
Language:English
Published: Nature Portfolio 2024-12-01
Series:Scientific Reports
Subjects:
Online Access:https://doi.org/10.1038/s41598-024-82957-9
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1841559452739698688
author Loredana Migliore
Valentina Cianfanelli
Fabrizia Zevolini
Monica Gesualdo
Leandro Marzuoli
Laura Patrussi
Cristina Ulivieri
Giuseppe Marotta
Francesco Cecconi
Francesca Finetti
Cosima T. Baldari
author_facet Loredana Migliore
Valentina Cianfanelli
Fabrizia Zevolini
Monica Gesualdo
Leandro Marzuoli
Laura Patrussi
Cristina Ulivieri
Giuseppe Marotta
Francesco Cecconi
Francesca Finetti
Cosima T. Baldari
author_sort Loredana Migliore
collection DOAJ
description Abstract The scaffold protein AMBRA1, which participates in the autophagy pathway, also promotes CD4+ T cell differentiation to Tregs independent of autophagy through its interactor PP2A. Here we have investigated the role of AMBRA1 in CD8+ T cell differentiation to cytotoxic T cells (CTL). AMBRA1 depletion in CD8+ T cells was associated with impaired expression of the transcription factors RUNX3 and T-BET that drive CTL differentiation and resulted in impaired acquisition of cytotoxic potential. These effects were recapitulated by pharmacological inhibition of the AMBRA1 activator ULK1 or its interactor PP2A. Based on the ability of PP2A to activate TFEB, we hypothesized a role for TFEB in the CTL differentiation program regulated by AMBRA1. We show that TFEB modulates RUNX3 and T-BET expression and the generation of killing-competent CTLs, and that AMBRA1 depletion, or ULK1 or PP2A inhibition, suppresses TFEB activity. These data highlight a role for AMBRA1, ULK1 and PP2A in CTL generation, mediated by TFEB, which we identify as a new pioneering transcription factor in the CTL differentiation program.
format Article
id doaj-art-97df8924a79e49b38eb383c0f7a79b79
institution Kabale University
issn 2045-2322
language English
publishDate 2024-12-01
publisher Nature Portfolio
record_format Article
series Scientific Reports
spelling doaj-art-97df8924a79e49b38eb383c0f7a79b792025-01-05T12:29:25ZengNature PortfolioScientific Reports2045-23222024-12-0114111410.1038/s41598-024-82957-9An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activationLoredana Migliore0Valentina Cianfanelli1Fabrizia Zevolini2Monica Gesualdo3Leandro Marzuoli4Laura Patrussi5Cristina Ulivieri6Giuseppe Marotta7Francesco Cecconi8Francesca Finetti9Cosima T. Baldari10Department of Life Sciences, University of SienaDepartment of Woman and Child Health and Public Health, Gynecologic Oncology Unit, Fondazione Policlinico Universitario A. Gemelli IRCCSDepartment of Life Sciences, University of SienaDepartment of Life Sciences, University of SienaDepartment of Life Sciences, University of SienaDepartment of Life Sciences, University of SienaDepartment of Life Sciences, University of SienaSiena University HospitalUniversità Cattolica del Sacro Cuore and Fondazione Policlinico Universitario Agostino Gemelli IRCCSDepartment of Life Sciences, University of SienaDepartment of Life Sciences, University of SienaAbstract The scaffold protein AMBRA1, which participates in the autophagy pathway, also promotes CD4+ T cell differentiation to Tregs independent of autophagy through its interactor PP2A. Here we have investigated the role of AMBRA1 in CD8+ T cell differentiation to cytotoxic T cells (CTL). AMBRA1 depletion in CD8+ T cells was associated with impaired expression of the transcription factors RUNX3 and T-BET that drive CTL differentiation and resulted in impaired acquisition of cytotoxic potential. These effects were recapitulated by pharmacological inhibition of the AMBRA1 activator ULK1 or its interactor PP2A. Based on the ability of PP2A to activate TFEB, we hypothesized a role for TFEB in the CTL differentiation program regulated by AMBRA1. We show that TFEB modulates RUNX3 and T-BET expression and the generation of killing-competent CTLs, and that AMBRA1 depletion, or ULK1 or PP2A inhibition, suppresses TFEB activity. These data highlight a role for AMBRA1, ULK1 and PP2A in CTL generation, mediated by TFEB, which we identify as a new pioneering transcription factor in the CTL differentiation program.https://doi.org/10.1038/s41598-024-82957-9AMBRA1Cytotoxic T cellLytic granule /PP2A / ULK1
spellingShingle Loredana Migliore
Valentina Cianfanelli
Fabrizia Zevolini
Monica Gesualdo
Leandro Marzuoli
Laura Patrussi
Cristina Ulivieri
Giuseppe Marotta
Francesco Cecconi
Francesca Finetti
Cosima T. Baldari
An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
Scientific Reports
AMBRA1
Cytotoxic T cell
Lytic granule /
PP2A / ULK1
title An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
title_full An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
title_fullStr An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
title_full_unstemmed An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
title_short An AMBRA1, ULK1 and PP2A regulatory network regulates cytotoxic T cell differentiation via TFEB activation
title_sort ambra1 ulk1 and pp2a regulatory network regulates cytotoxic t cell differentiation via tfeb activation
topic AMBRA1
Cytotoxic T cell
Lytic granule /
PP2A / ULK1
url https://doi.org/10.1038/s41598-024-82957-9
work_keys_str_mv AT loredanamigliore anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT valentinacianfanelli anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT fabriziazevolini anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT monicagesualdo anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT leandromarzuoli anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT laurapatrussi anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT cristinaulivieri anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT giuseppemarotta anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT francescocecconi anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT francescafinetti anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT cosimatbaldari anambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT loredanamigliore ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT valentinacianfanelli ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT fabriziazevolini ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT monicagesualdo ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT leandromarzuoli ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT laurapatrussi ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT cristinaulivieri ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT giuseppemarotta ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT francescocecconi ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT francescafinetti ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation
AT cosimatbaldari ambra1ulk1andpp2aregulatorynetworkregulatescytotoxictcelldifferentiationviatfebactivation