Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows

Abstract The growing global population and rising living standards require a higher supply of dairy products. Dairy cows are the most important source of milk production, with billions of microorganisms present in the rumen. This study aims to assess the impact of direct-fed microbials (DFMs) contai...

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Main Authors: Aoyu Jiang, Zixin Liu, Ziyan Yang, Shizhe Zhang, Jian Wu, Chuanshe Zhou, Zhiliang Tan
Format: Article
Language:English
Published: BMC 2025-07-01
Series:Animal Microbiome
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Online Access:https://doi.org/10.1186/s42523-025-00437-5
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author Aoyu Jiang
Zixin Liu
Ziyan Yang
Shizhe Zhang
Jian Wu
Chuanshe Zhou
Zhiliang Tan
author_facet Aoyu Jiang
Zixin Liu
Ziyan Yang
Shizhe Zhang
Jian Wu
Chuanshe Zhou
Zhiliang Tan
author_sort Aoyu Jiang
collection DOAJ
description Abstract The growing global population and rising living standards require a higher supply of dairy products. Dairy cows are the most important source of milk production, with billions of microorganisms present in the rumen. This study aims to assess the impact of direct-fed microbials (DFMs) containing Lentilactobacillus buchneri, Bifidobacterium longum, and Pediococcus pentosaceus on rumen fermentation parameters, rumen microbial composition, and lactation performance in dairy cows. Twelve Sanhe dairy cows with similar physical condition, parity and lactation were randomly divided into two groups of six cows each. The control group was fed a basal diet and the treatment group was fed a basal diet plus DFMs (20 g/day) for the experimental period of 60 days. Rumen fluid, blood, milk, and feces were collected from cows for detection and analysis. DFMs enhanced the apparent total tract digestibility of crude protein and neutral detergent fiber (P < 0.05), and elevated milk protein rate of Sanhe dairy cows (P < 0.05). In the ruminal environment, supplementation of DFMs promoted the production of microbial proteins, acetate and total volatile fatty acids (P < 0.05). High-throughput sequencing analysis of rumen microorganisms revealed that relative abundance of DFMs were elevated in the treatment group, and DFMs enhanced the relative abundance of Prevotella, Pseudoclostridium and Faecalibacterium in the rumen (P < 0.05). In predictive analysis of microbial functional genes, the treatment group was enriched with more genes encoding hemicellulose-degrading enzymes such as GH10, GH30, and GH67, while the relative abundance of genes encoding enzymes that metabolize ammonia was increased. In addition, the analysis of rumen bacteriophages showed that DFMs significantly increased the relative abundance of bacteriophages infecting Prevotella in the rumen. Overall, DFMs enhanced the degradation of protein and carbohydrate in Sanhe dairy cows. There was a positive correlation with the relative abundance of Prevotella, which may provide substant amino acids and energy for milk protein synthesis, improving the lactation performance of Sanhe dairy cows.
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publishDate 2025-07-01
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series Animal Microbiome
spelling doaj-art-96bcf9e55a624e7598a4f57d748f80a52025-08-20T03:46:24ZengBMCAnimal Microbiome2524-46712025-07-017111310.1186/s42523-025-00437-5Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cowsAoyu Jiang0Zixin Liu1Ziyan Yang2Shizhe Zhang3Jian Wu4Chuanshe Zhou5Zhiliang Tan6State Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesState Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesNingxia UniversityState Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesState Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesState Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesState Key Laboratory of Forage Breeding-by-Design and Utilization, National Engineering Laboratory for Pollution Control and Waste Utilization in Livestock and Poultry Production, and Hunan Provincial Key Laboratory of Animal Nutritional Physiology and Metabolic Process, Institute of Subtropical Agriculture, Chinese Academy of SciencesAbstract The growing global population and rising living standards require a higher supply of dairy products. Dairy cows are the most important source of milk production, with billions of microorganisms present in the rumen. This study aims to assess the impact of direct-fed microbials (DFMs) containing Lentilactobacillus buchneri, Bifidobacterium longum, and Pediococcus pentosaceus on rumen fermentation parameters, rumen microbial composition, and lactation performance in dairy cows. Twelve Sanhe dairy cows with similar physical condition, parity and lactation were randomly divided into two groups of six cows each. The control group was fed a basal diet and the treatment group was fed a basal diet plus DFMs (20 g/day) for the experimental period of 60 days. Rumen fluid, blood, milk, and feces were collected from cows for detection and analysis. DFMs enhanced the apparent total tract digestibility of crude protein and neutral detergent fiber (P < 0.05), and elevated milk protein rate of Sanhe dairy cows (P < 0.05). In the ruminal environment, supplementation of DFMs promoted the production of microbial proteins, acetate and total volatile fatty acids (P < 0.05). High-throughput sequencing analysis of rumen microorganisms revealed that relative abundance of DFMs were elevated in the treatment group, and DFMs enhanced the relative abundance of Prevotella, Pseudoclostridium and Faecalibacterium in the rumen (P < 0.05). In predictive analysis of microbial functional genes, the treatment group was enriched with more genes encoding hemicellulose-degrading enzymes such as GH10, GH30, and GH67, while the relative abundance of genes encoding enzymes that metabolize ammonia was increased. In addition, the analysis of rumen bacteriophages showed that DFMs significantly increased the relative abundance of bacteriophages infecting Prevotella in the rumen. Overall, DFMs enhanced the degradation of protein and carbohydrate in Sanhe dairy cows. There was a positive correlation with the relative abundance of Prevotella, which may provide substant amino acids and energy for milk protein synthesis, improving the lactation performance of Sanhe dairy cows.https://doi.org/10.1186/s42523-025-00437-5Sanhe dairy cowsDFMsMetagenomeBacteriophage
spellingShingle Aoyu Jiang
Zixin Liu
Ziyan Yang
Shizhe Zhang
Jian Wu
Chuanshe Zhou
Zhiliang Tan
Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
Animal Microbiome
Sanhe dairy cows
DFMs
Metagenome
Bacteriophage
title Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
title_full Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
title_fullStr Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
title_full_unstemmed Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
title_short Direct-fed microbials optimize ruminal fermentation, microbial ecosystem and milk quality to enhance the lactation performance of Sanhe dairy cows
title_sort direct fed microbials optimize ruminal fermentation microbial ecosystem and milk quality to enhance the lactation performance of sanhe dairy cows
topic Sanhe dairy cows
DFMs
Metagenome
Bacteriophage
url https://doi.org/10.1186/s42523-025-00437-5
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