Refining coarse-grained molecular topologies: a Bayesian optimization approach
Abstract Molecular Dynamics (MD) simulations are vital for predicting the physical and chemical properties of molecular systems across various ensembles. While All-Atom (AA) MD provides high accuracy, its computational cost has spurred the development of Coarse-Grained MD (CGMD), which simplifies mo...
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| Main Authors: | Pranoy Ray, Adam P. Generale, Nikhith Vankireddy, Yuichiro Asoma, Masataka Nakauchi, Haein Lee, Katsuhisa Yoshida, Yoshishige Okuno, Surya R. Kalidindi |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Nature Portfolio
2025-07-01
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| Series: | npj Computational Materials |
| Online Access: | https://doi.org/10.1038/s41524-025-01729-9 |
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