Refining coarse-grained molecular topologies: a Bayesian optimization approach

Abstract Molecular Dynamics (MD) simulations are vital for predicting the physical and chemical properties of molecular systems across various ensembles. While All-Atom (AA) MD provides high accuracy, its computational cost has spurred the development of Coarse-Grained MD (CGMD), which simplifies mo...

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Bibliographic Details
Main Authors: Pranoy Ray, Adam P. Generale, Nikhith Vankireddy, Yuichiro Asoma, Masataka Nakauchi, Haein Lee, Katsuhisa Yoshida, Yoshishige Okuno, Surya R. Kalidindi
Format: Article
Language:English
Published: Nature Portfolio 2025-07-01
Series:npj Computational Materials
Online Access:https://doi.org/10.1038/s41524-025-01729-9
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