Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US

The recent outbreak of highly pathogenic avian influenza (HPAI) in dairy cows has created public health concerns about the potential of consumers being exposed to live virus from commercial dairy products. Previous studies support that pasteurization effectively inactivates avian influenza in milk a...

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Main Authors: David L. Suarez, Iryna V. Goraichuk, Lindsay Killmaster, Erica Spackman, Nicole J. Clausen, Tristan J. Colonius, Cynthia L. Leonard, Monica L. Metz
Format: Article
Language:English
Published: Elsevier 2025-01-01
Series:Journal of Food Protection
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Online Access:http://www.sciencedirect.com/science/article/pii/S0362028X24002151
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author David L. Suarez
Iryna V. Goraichuk
Lindsay Killmaster
Erica Spackman
Nicole J. Clausen
Tristan J. Colonius
Cynthia L. Leonard
Monica L. Metz
author_facet David L. Suarez
Iryna V. Goraichuk
Lindsay Killmaster
Erica Spackman
Nicole J. Clausen
Tristan J. Colonius
Cynthia L. Leonard
Monica L. Metz
author_sort David L. Suarez
collection DOAJ
description The recent outbreak of highly pathogenic avian influenza (HPAI) in dairy cows has created public health concerns about the potential of consumers being exposed to live virus from commercial dairy products. Previous studies support that pasteurization effectively inactivates avian influenza in milk and an earlier retail milk survey showed viral RNA, but no live virus could be detected in the dairy products tested. Because of the variety of products and processing methods in which milk is used, additional product testing was conducted to determine if HPAI viral RNA could be detected in retail dairy samples, and for positive samples by quantitative real-time RT-PCR (qRT-PCR) further testing for the presence of live virus. Revised protocols were developed to extract RNA from solid dairy products including cheese and butter. The solid dairy product was mechanically liquified with garnet and zirconium beads in a bead beater diluted 1–4 with BHI media. This preprocessing step was suitable in allowing efficient RNA extraction with standard methods. Trial studies were conducted with different cheese types with spiked-in avian influenza virus to show that inoculation of the liquified cheese into embryonating chicken eggs was not toxic to the embryos and allowed virus replication. A total of 167 retail dairy samples, including a variety of cheeses, butter, ice cream, and fluid milk were collected as part of a nationwide survey. A total of 17.4% (29/167) of the samples had detectable viral RNA by qRT-PCR targeting the matrix gene, but all PCR-positive samples were negative for live virus after testing with embryonating egg inoculation. The viral RNA was also evaluated by sequencing part of the hemagglutinin gene using a revised protocol optimized to deal with the fragmented viral RNA. The sequence analysis showed all viral RNA-positive samples were highly similar to previously reported HPAI dairy cow isolates. Using the revised protocols, it was determined that HPAI viral RNA could be detected in a variety of dairy products, but existing pasteurization methods effectively inactivate the virus assuring consumer safety.
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spelling doaj-art-88e4ac8057b84b0c899635ddfc4540532025-01-09T06:12:37ZengElsevierJournal of Food Protection0362-028X2025-01-01881100431Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the USDavid L. Suarez0Iryna V. Goraichuk1Lindsay Killmaster2Erica Spackman3Nicole J. Clausen4Tristan J. Colonius5Cynthia L. Leonard6Monica L. Metz7Exotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, United States National Poultry Research Center, Agricultural Research Service, USDA, 934 College Station Rd, Athens, GA 30605, USA; Corresponding author.Exotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, United States National Poultry Research Center, Agricultural Research Service, USDA, 934 College Station Rd, Athens, GA 30605, USAExotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, United States National Poultry Research Center, Agricultural Research Service, USDA, 934 College Station Rd, Athens, GA 30605, USAExotic and Emerging Avian Viral Disease Research Unit, Southeast Poultry Research Laboratory, United States National Poultry Research Center, Agricultural Research Service, USDA, 934 College Station Rd, Athens, GA 30605, USAOffice of Regulatory Affairs, United States Food and Drug Administration, White Oak, Maryland, USACenter for Veterinary Medicine, United States Food and Drug Administration, Rockville, Maryland, USACenter of Food Safety and Applied Nutrition, United States Food and Drug Administration, College Park, Maryland, USACenter of Food Safety and Applied Nutrition, United States Food and Drug Administration, College Park, Maryland, USAThe recent outbreak of highly pathogenic avian influenza (HPAI) in dairy cows has created public health concerns about the potential of consumers being exposed to live virus from commercial dairy products. Previous studies support that pasteurization effectively inactivates avian influenza in milk and an earlier retail milk survey showed viral RNA, but no live virus could be detected in the dairy products tested. Because of the variety of products and processing methods in which milk is used, additional product testing was conducted to determine if HPAI viral RNA could be detected in retail dairy samples, and for positive samples by quantitative real-time RT-PCR (qRT-PCR) further testing for the presence of live virus. Revised protocols were developed to extract RNA from solid dairy products including cheese and butter. The solid dairy product was mechanically liquified with garnet and zirconium beads in a bead beater diluted 1–4 with BHI media. This preprocessing step was suitable in allowing efficient RNA extraction with standard methods. Trial studies were conducted with different cheese types with spiked-in avian influenza virus to show that inoculation of the liquified cheese into embryonating chicken eggs was not toxic to the embryos and allowed virus replication. A total of 167 retail dairy samples, including a variety of cheeses, butter, ice cream, and fluid milk were collected as part of a nationwide survey. A total of 17.4% (29/167) of the samples had detectable viral RNA by qRT-PCR targeting the matrix gene, but all PCR-positive samples were negative for live virus after testing with embryonating egg inoculation. The viral RNA was also evaluated by sequencing part of the hemagglutinin gene using a revised protocol optimized to deal with the fragmented viral RNA. The sequence analysis showed all viral RNA-positive samples were highly similar to previously reported HPAI dairy cow isolates. Using the revised protocols, it was determined that HPAI viral RNA could be detected in a variety of dairy products, but existing pasteurization methods effectively inactivate the virus assuring consumer safety.http://www.sciencedirect.com/science/article/pii/S0362028X24002151CheeseDairy cowsHighly pathogenic avian influenzaMilkRetail dairy sample surveyZoonotic infection
spellingShingle David L. Suarez
Iryna V. Goraichuk
Lindsay Killmaster
Erica Spackman
Nicole J. Clausen
Tristan J. Colonius
Cynthia L. Leonard
Monica L. Metz
Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
Journal of Food Protection
Cheese
Dairy cows
Highly pathogenic avian influenza
Milk
Retail dairy sample survey
Zoonotic infection
title Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
title_full Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
title_fullStr Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
title_full_unstemmed Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
title_short Testing of Retail Cheese, Butter, Ice Cream, and Other Dairy Products for Highly Pathogenic Avian Influenza in the US
title_sort testing of retail cheese butter ice cream and other dairy products for highly pathogenic avian influenza in the us
topic Cheese
Dairy cows
Highly pathogenic avian influenza
Milk
Retail dairy sample survey
Zoonotic infection
url http://www.sciencedirect.com/science/article/pii/S0362028X24002151
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