DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs

Summary: Glucose binding can alter protein oligomerization to enable differentiation. Here, we demonstrate that glucose binding is a general capacity of DExD/H-box RNA helicases, including DDX50, which was found to be essential for the differentiation of diverse cell types. Glucose binding to conser...

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Main Authors: Weili Miao, Douglas F. Porter, Zurab Siprashvili, Ian D. Ferguson, Luca Ducoli, Duy T. Nguyen, Lisa A. Ko, Vanessa Lopez-Pajares, Suhas Srinivasan, Audrey W. Hong, Yen-Yu Yang, Zhongwen Cao, Robin M. Meyers, Jordan M. Meyers, Shiying Tao, Yinsheng Wang, Paul A. Khavari
Format: Article
Language:English
Published: Elsevier 2025-01-01
Series:Cell Reports
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Online Access:http://www.sciencedirect.com/science/article/pii/S2211124724015250
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author Weili Miao
Douglas F. Porter
Zurab Siprashvili
Ian D. Ferguson
Luca Ducoli
Duy T. Nguyen
Lisa A. Ko
Vanessa Lopez-Pajares
Suhas Srinivasan
Audrey W. Hong
Yen-Yu Yang
Zhongwen Cao
Robin M. Meyers
Jordan M. Meyers
Shiying Tao
Yinsheng Wang
Paul A. Khavari
author_facet Weili Miao
Douglas F. Porter
Zurab Siprashvili
Ian D. Ferguson
Luca Ducoli
Duy T. Nguyen
Lisa A. Ko
Vanessa Lopez-Pajares
Suhas Srinivasan
Audrey W. Hong
Yen-Yu Yang
Zhongwen Cao
Robin M. Meyers
Jordan M. Meyers
Shiying Tao
Yinsheng Wang
Paul A. Khavari
author_sort Weili Miao
collection DOAJ
description Summary: Glucose binding can alter protein oligomerization to enable differentiation. Here, we demonstrate that glucose binding is a general capacity of DExD/H-box RNA helicases, including DDX50, which was found to be essential for the differentiation of diverse cell types. Glucose binding to conserved DDX50 ATP binding sequences altered protein conformation and dissociated DDX50 dimers. DDX50 monomers bound STAU1 to redirect STAU1 from an RNA-decay-promoting complex with UPF1 to a DDX50-STAU1 ribonuclear complex. DDX50 and STAU1 bound and stabilized a common set of essential pro-differentiation RNAs, including JUN, OVOL1, CEBPB, PRDM1, and TINCR, whose structures they also modified. These findings uncover a DDX50-mediated mechanism of reprograming STAU1 from its canonical role in Staufen-mediated mRNA decay to an opposite role stabilizing pro-differentiation RNAs and establish an activity for glucose in controlling RNA structure and stability.
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series Cell Reports
spelling doaj-art-8899475619214a60802a514e9da7b2a82025-01-08T04:52:25ZengElsevierCell Reports2211-12472025-01-01441115174DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAsWeili Miao0Douglas F. Porter1Zurab Siprashvili2Ian D. Ferguson3Luca Ducoli4Duy T. Nguyen5Lisa A. Ko6Vanessa Lopez-Pajares7Suhas Srinivasan8Audrey W. Hong9Yen-Yu Yang10Zhongwen Cao11Robin M. Meyers12Jordan M. Meyers13Shiying Tao14Yinsheng Wang15Paul A. Khavari16Program in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USA; Corresponding authorProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Cancer Biology, Stanford University, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USADepartment of Chemistry, University of California, Riverside, Riverside, CA, USADepartment of Chemistry, University of California, Riverside, Riverside, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USADepartment of Chemistry, University of California, Riverside, Riverside, CA, USAProgram in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USA; Program in Cancer Biology, Stanford University, Stanford, CA, USA; Veterans Affairs Palo Alto Healthcare System, Palo Alto, CA, USA; Corresponding authorSummary: Glucose binding can alter protein oligomerization to enable differentiation. Here, we demonstrate that glucose binding is a general capacity of DExD/H-box RNA helicases, including DDX50, which was found to be essential for the differentiation of diverse cell types. Glucose binding to conserved DDX50 ATP binding sequences altered protein conformation and dissociated DDX50 dimers. DDX50 monomers bound STAU1 to redirect STAU1 from an RNA-decay-promoting complex with UPF1 to a DDX50-STAU1 ribonuclear complex. DDX50 and STAU1 bound and stabilized a common set of essential pro-differentiation RNAs, including JUN, OVOL1, CEBPB, PRDM1, and TINCR, whose structures they also modified. These findings uncover a DDX50-mediated mechanism of reprograming STAU1 from its canonical role in Staufen-mediated mRNA decay to an opposite role stabilizing pro-differentiation RNAs and establish an activity for glucose in controlling RNA structure and stability.http://www.sciencedirect.com/science/article/pii/S2211124724015250CP: Molecular biology
spellingShingle Weili Miao
Douglas F. Porter
Zurab Siprashvili
Ian D. Ferguson
Luca Ducoli
Duy T. Nguyen
Lisa A. Ko
Vanessa Lopez-Pajares
Suhas Srinivasan
Audrey W. Hong
Yen-Yu Yang
Zhongwen Cao
Robin M. Meyers
Jordan M. Meyers
Shiying Tao
Yinsheng Wang
Paul A. Khavari
DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
Cell Reports
CP: Molecular biology
title DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
title_full DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
title_fullStr DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
title_full_unstemmed DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
title_short DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs
title_sort ddx50 cooperates with stau1 to effect stabilization of pro differentiation rnas
topic CP: Molecular biology
url http://www.sciencedirect.com/science/article/pii/S2211124724015250
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