CausalXtract, a flexible pipeline to extract causal effects from live-cell time-lapse imaging data

CausalXtract, a flexible pipeline to extract causal effects from live-cell time-lapse imaging data

Live-cell microscopy routinely provides massive amounts of time-lapse images of complex cellular systems under various physiological or therapeutic conditions. However, this wealth of data remains difficult to interpret in terms of causal effects. Here, we describe CausalXtract, a flexible computati...

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Bibliographic Details
Main Authors: Franck Simon, Maria Colomba Comes, Tiziana Tocci, Louise Dupuis, Vincent Cabeli, Nikita Lagrange, Arianna Mencattini, Maria Carla Parrini, Eugenio Martinelli, Herve Isambert
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2025-01-01
Series:eLife
Subjects:
causal inference
time-lapse image analysis
live-cell imaging
tumor on chip
causal discovery
granger causality
Online Access:https://elifesciences.org/articles/95485
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https://elifesciences.org/articles/95485

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