The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae)
Emilia prenanthoidea (Emilia prenanthoidea DC. Prodr. (DC.), 1838) belongs to the Asteraceae family and is a popular Miao medicinal plant in Guizhou, China. It has anti-inflammatory and antitumor properties. It is often used as a medication for healing injury, clearing heat and detoxifying, boosting...
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Taylor & Francis Group
2025-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2025.2449686 |
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| author | Yacheng Huang Ni Zhao Min Liang Xuying Wang Shudong Zhang Chao Zhao Linya Liu |
| author_facet | Yacheng Huang Ni Zhao Min Liang Xuying Wang Shudong Zhang Chao Zhao Linya Liu |
| author_sort | Yacheng Huang |
| collection | DOAJ |
| description | Emilia prenanthoidea (Emilia prenanthoidea DC. Prodr. (DC.), 1838) belongs to the Asteraceae family and is a popular Miao medicinal plant in Guizhou, China. It has anti-inflammatory and antitumor properties. It is often used as a medication for healing injury, clearing heat and detoxifying, boosting blood circulation and eliminating blood stasis, and lowering inflammation and diuresis. This is the first reported study on the complete chloroplast genome of E. prenanthoidea. The E. prenanthoidea chloroplast genome is 151, 406 bp long, contains a pair of inverted repeats (IRs 24,705 bp), and is separated into a large single-copy (84,010 bp) and a short single-copy (17,986 bp) region. One hundred thirty genes were predicted, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Nine protein-coding genes (rps16, rpoC1, atpF, petB, petD, rpl16, rpl2, ndhB, ndhA) had a single intron, two protein-coding genes (ycf3, clpP) had two, and the remainder had none. The phylogenetic analysis found Emilia prenanthoidea and Emilia sonchifolia clustered on a single branch, with Pericallis hybrida as its sister group. This study enhances our understanding of the evolutionary relationships within the Asteraceae family and provides valuable insights for developing germplasm-specific molecular markers. |
| format | Article |
| id | doaj-art-7adace310d4c4d8b8a8fef96a8e7e080 |
| institution | Kabale University |
| issn | 2380-2359 |
| language | English |
| publishDate | 2025-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-7adace310d4c4d8b8a8fef96a8e7e0802025-02-03T07:18:56ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592025-03-0110316216610.1080/23802359.2025.2449686The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae)Yacheng Huang0Ni Zhao1Min Liang2Xuying Wang3Shudong Zhang4Chao Zhao5Linya Liu6School of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, ChinaKey Laboratory for Information System of Mountainous Areas and Protection of Ecological Environment, Guizhou Normal University, Guiyang, ChinaSchool of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, ChinaSchool of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, ChinaSchool of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, ChinaKey Laboratory for Information System of Mountainous Areas and Protection of Ecological Environment, Guizhou Normal University, Guiyang, ChinaSchool of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, ChinaEmilia prenanthoidea (Emilia prenanthoidea DC. Prodr. (DC.), 1838) belongs to the Asteraceae family and is a popular Miao medicinal plant in Guizhou, China. It has anti-inflammatory and antitumor properties. It is often used as a medication for healing injury, clearing heat and detoxifying, boosting blood circulation and eliminating blood stasis, and lowering inflammation and diuresis. This is the first reported study on the complete chloroplast genome of E. prenanthoidea. The E. prenanthoidea chloroplast genome is 151, 406 bp long, contains a pair of inverted repeats (IRs 24,705 bp), and is separated into a large single-copy (84,010 bp) and a short single-copy (17,986 bp) region. One hundred thirty genes were predicted, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Nine protein-coding genes (rps16, rpoC1, atpF, petB, petD, rpl16, rpl2, ndhB, ndhA) had a single intron, two protein-coding genes (ycf3, clpP) had two, and the remainder had none. The phylogenetic analysis found Emilia prenanthoidea and Emilia sonchifolia clustered on a single branch, with Pericallis hybrida as its sister group. This study enhances our understanding of the evolutionary relationships within the Asteraceae family and provides valuable insights for developing germplasm-specific molecular markers.https://www.tandfonline.com/doi/10.1080/23802359.2025.2449686AsteraceaeEmilia prenanthoideachloroplast genomephylogenetic analysis |
| spellingShingle | Yacheng Huang Ni Zhao Min Liang Xuying Wang Shudong Zhang Chao Zhao Linya Liu The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) Mitochondrial DNA. Part B. Resources Asteraceae Emilia prenanthoidea chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) |
| title_full | The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) |
| title_fullStr | The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) |
| title_full_unstemmed | The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) |
| title_short | The complete chloroplast genome and phylogenetic analysis of Emilia prenanthoidea (Asteraceae) |
| title_sort | complete chloroplast genome and phylogenetic analysis of emilia prenanthoidea asteraceae |
| topic | Asteraceae Emilia prenanthoidea chloroplast genome phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2025.2449686 |
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