Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt
The Bacillus velezensis strain HC-5, isolated from rhizosphere soil of ginger, exhibits effective biocontrol activity against ginger bacterial wilt. However, its genomic information has remained unexplored. This study presents the complete genome sequence of B. velezensis HC-5. The genome spans 4,23...
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| Language: | English |
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The American Phytopathological Society
2024-12-01
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| Series: | PhytoFrontiers |
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| Online Access: | https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-01-24-0002-A |
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| author | Pengjie He Wenjia Wang Jiajia Zhang Yuanju Zhang Wenyan Cui |
| author_facet | Pengjie He Wenjia Wang Jiajia Zhang Yuanju Zhang Wenyan Cui |
| author_sort | Pengjie He |
| collection | DOAJ |
| description | The Bacillus velezensis strain HC-5, isolated from rhizosphere soil of ginger, exhibits effective biocontrol activity against ginger bacterial wilt. However, its genomic information has remained unexplored. This study presents the complete genome sequence of B. velezensis HC-5. The genome spans 4,237,244 bp and consists of 4,258 genes, with a total GC content of 45.85%. The HC-5 genome comprises 4,058 coding genes, 86 transfer RNAs, 27 ribosomal RNAs (rRNAs), 19 small RNAs (sRNAs), 70 interspersed repeats, and 74 tandem repeats. Moreover, we identified 10 gene clusters responsible for the biosynthesis of antibiotic compounds and 28 two-component systems associated with the bacterium's environmental adaptability. This genome sequence of B. velezensis HC-5 enhances our understanding of its biocontrol mechanisms and supports its potential development as an effective biocontrol agent for managing bacterial wilt in ginger production. [Figure: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license. |
| format | Article |
| id | doaj-art-2d29cc0cbcee4b08ad6296a94482f654 |
| institution | Kabale University |
| issn | 2690-5442 |
| language | English |
| publishDate | 2024-12-01 |
| publisher | The American Phytopathological Society |
| record_format | Article |
| series | PhytoFrontiers |
| spelling | doaj-art-2d29cc0cbcee4b08ad6296a94482f6542024-12-24T21:19:08ZengThe American Phytopathological SocietyPhytoFrontiers2690-54422024-12-014481782010.1094/PHYTOFR-01-24-0002-AGenome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial WiltPengjie He0Wenjia Wang1Jiajia Zhang2Yuanju Zhang3Wenyan Cui4Guizhou University of Traditional Chinese Medicine, Guiyang 550000, Guizhou, ChinaGuizhou University of Traditional Chinese Medicine, Guiyang 550000, Guizhou, ChinaGuizhou University of Traditional Chinese Medicine, Guiyang 550000, Guizhou, ChinaGuizhou University of Traditional Chinese Medicine, Guiyang 550000, Guizhou, ChinaGuizhou University of Traditional Chinese Medicine, Guiyang 550000, Guizhou, ChinaThe Bacillus velezensis strain HC-5, isolated from rhizosphere soil of ginger, exhibits effective biocontrol activity against ginger bacterial wilt. However, its genomic information has remained unexplored. This study presents the complete genome sequence of B. velezensis HC-5. The genome spans 4,237,244 bp and consists of 4,258 genes, with a total GC content of 45.85%. The HC-5 genome comprises 4,058 coding genes, 86 transfer RNAs, 27 ribosomal RNAs (rRNAs), 19 small RNAs (sRNAs), 70 interspersed repeats, and 74 tandem repeats. Moreover, we identified 10 gene clusters responsible for the biosynthesis of antibiotic compounds and 28 two-component systems associated with the bacterium's environmental adaptability. This genome sequence of B. velezensis HC-5 enhances our understanding of its biocontrol mechanisms and supports its potential development as an effective biocontrol agent for managing bacterial wilt in ginger production. [Figure: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-01-24-0002-Abacterial wiltbiocontrolgenomeginger |
| spellingShingle | Pengjie He Wenjia Wang Jiajia Zhang Yuanju Zhang Wenyan Cui Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt PhytoFrontiers bacterial wilt biocontrol genome ginger |
| title | Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt |
| title_full | Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt |
| title_fullStr | Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt |
| title_full_unstemmed | Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt |
| title_short | Genome Sequence Resource of Bacillus velezensis Strain HC-5, Revealing Its Potential as a Native Biological Control Agent Against Ginger Bacterial Wilt |
| title_sort | genome sequence resource of bacillus velezensis strain hc 5 revealing its potential as a native biological control agent against ginger bacterial wilt |
| topic | bacterial wilt biocontrol genome ginger |
| url | https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-01-24-0002-A |
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