Intein-mediated split SaCas9 for genome editing in plants

Virus-induced genome editing (VIGE) technologies have been developed to address the limitations to plant genome editing, which heavily relies on genetic transformation and regeneration. However, the application of VIGE in plants is hampered by the challenge posed by the size of the commonly used gen...

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Main Authors: Danling Hu, Lizhe Hu, Yaqiang Lu, Xiao Dong, Xingyu Cao, Shasha Bai, Lingang Zhang, Dongming Li, Yongwei Sun
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-01-01
Series:Frontiers in Genome Editing
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Online Access:https://www.frontiersin.org/articles/10.3389/fgeed.2024.1506468/full
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author Danling Hu
Lizhe Hu
Yaqiang Lu
Xiao Dong
Xingyu Cao
Shasha Bai
Lingang Zhang
Dongming Li
Yongwei Sun
author_facet Danling Hu
Lizhe Hu
Yaqiang Lu
Xiao Dong
Xingyu Cao
Shasha Bai
Lingang Zhang
Dongming Li
Yongwei Sun
author_sort Danling Hu
collection DOAJ
description Virus-induced genome editing (VIGE) technologies have been developed to address the limitations to plant genome editing, which heavily relies on genetic transformation and regeneration. However, the application of VIGE in plants is hampered by the challenge posed by the size of the commonly used gene editing nucleases, Cas9 and Cas12a. To overcome this challenge, we employed intein-mediated protein splicing to divide the SaCas9 transcript into two segments (Split-v1) and three segments (Split-v3). The Split-v1 system demonstrated genome editing efficiencies in transgenic plants comparable to those achieved with wild-type SaCas9, with efficiencies ranging from 70.2% to 96.1%. Additionally, we constructed barley stripe mosaic virus (BSMV)-based vectors to co-express Split-v1 SaCas9 and gRNAs targeting LcHRC, LcGW2, and LcTB1 in sheepgrass (Leymus chinensis), a Gramineae forage species known for its recalcitrance to genetic transformation. Infected leaves of sheepgrass exhibited genome editing efficiencies ranging from 10.40% to 37.03%. These results demonstrate the potential of intein-mediated split nuclease systems to broaden the applicability of VIGE in challenging plant species.
format Article
id doaj-art-2c72e7d0f2b94a8a8053fc5c291e0db6
institution Kabale University
issn 2673-3439
language English
publishDate 2025-01-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Genome Editing
spelling doaj-art-2c72e7d0f2b94a8a8053fc5c291e0db62025-01-08T06:11:40ZengFrontiers Media S.A.Frontiers in Genome Editing2673-34392025-01-01610.3389/fgeed.2024.15064681506468Intein-mediated split SaCas9 for genome editing in plantsDanling HuLizhe HuYaqiang LuXiao DongXingyu CaoShasha BaiLingang ZhangDongming LiYongwei SunVirus-induced genome editing (VIGE) technologies have been developed to address the limitations to plant genome editing, which heavily relies on genetic transformation and regeneration. However, the application of VIGE in plants is hampered by the challenge posed by the size of the commonly used gene editing nucleases, Cas9 and Cas12a. To overcome this challenge, we employed intein-mediated protein splicing to divide the SaCas9 transcript into two segments (Split-v1) and three segments (Split-v3). The Split-v1 system demonstrated genome editing efficiencies in transgenic plants comparable to those achieved with wild-type SaCas9, with efficiencies ranging from 70.2% to 96.1%. Additionally, we constructed barley stripe mosaic virus (BSMV)-based vectors to co-express Split-v1 SaCas9 and gRNAs targeting LcHRC, LcGW2, and LcTB1 in sheepgrass (Leymus chinensis), a Gramineae forage species known for its recalcitrance to genetic transformation. Infected leaves of sheepgrass exhibited genome editing efficiencies ranging from 10.40% to 37.03%. These results demonstrate the potential of intein-mediated split nuclease systems to broaden the applicability of VIGE in challenging plant species.https://www.frontiersin.org/articles/10.3389/fgeed.2024.1506468/fullCRISPR/CasinteinSaCas9VIGEplants
spellingShingle Danling Hu
Lizhe Hu
Yaqiang Lu
Xiao Dong
Xingyu Cao
Shasha Bai
Lingang Zhang
Dongming Li
Yongwei Sun
Intein-mediated split SaCas9 for genome editing in plants
Frontiers in Genome Editing
CRISPR/Cas
intein
SaCas9
VIGE
plants
title Intein-mediated split SaCas9 for genome editing in plants
title_full Intein-mediated split SaCas9 for genome editing in plants
title_fullStr Intein-mediated split SaCas9 for genome editing in plants
title_full_unstemmed Intein-mediated split SaCas9 for genome editing in plants
title_short Intein-mediated split SaCas9 for genome editing in plants
title_sort intein mediated split sacas9 for genome editing in plants
topic CRISPR/Cas
intein
SaCas9
VIGE
plants
url https://www.frontiersin.org/articles/10.3389/fgeed.2024.1506468/full
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AT xiaodong inteinmediatedsplitsacas9forgenomeeditinginplants
AT xingyucao inteinmediatedsplitsacas9forgenomeeditinginplants
AT shashabai inteinmediatedsplitsacas9forgenomeeditinginplants
AT lingangzhang inteinmediatedsplitsacas9forgenomeeditinginplants
AT dongmingli inteinmediatedsplitsacas9forgenomeeditinginplants
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