Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis

Abstract Background Spermatogenesis is a pivotal biological process for the precise transmission of paternal genetic information, governed by a highly complex and dynamically regulated testicular microenvironment. Although mammalian research has characterized germ cell development at the single-cell...

Full description

Saved in:
Bibliographic Details
Main Authors: Haishan Guo, Jianing Liu, Mingzhen Xu, Tingqi Zhu, Shuangxing Liu, Pingquan Liu, Huayuan Liu, Shi Tang, Zhunan Li, Weiwei Jin, Donghua Li, Yadong Tian, Xiangtao Kang, Guirong Sun
Format: Article
Language:English
Published: BMC 2025-08-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-025-11944-9
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1849238062836482048
author Haishan Guo
Jianing Liu
Mingzhen Xu
Tingqi Zhu
Shuangxing Liu
Pingquan Liu
Huayuan Liu
Shi Tang
Zhunan Li
Weiwei Jin
Donghua Li
Yadong Tian
Xiangtao Kang
Guirong Sun
author_facet Haishan Guo
Jianing Liu
Mingzhen Xu
Tingqi Zhu
Shuangxing Liu
Pingquan Liu
Huayuan Liu
Shi Tang
Zhunan Li
Weiwei Jin
Donghua Li
Yadong Tian
Xiangtao Kang
Guirong Sun
author_sort Haishan Guo
collection DOAJ
description Abstract Background Spermatogenesis is a pivotal biological process for the precise transmission of paternal genetic information, governed by a highly complex and dynamically regulated testicular microenvironment. Although mammalian research has characterized germ cell development at the single-cell level, differences in reproductive strategies limit the relevance of these findings to avian species. Results We employed single-cell RNA sequencing (scRNA-seq) to analyze the testes of the “Yufen 1” H line roosters at five distinct developmental stages: birth, rapid testicular development, sexual maturity, physical maturity, and senescence. By constructing a single-cell transcriptomic atlas, we identified ten somatic cell subtypes and four germ cell subtypes, thereby elucidating the dynamic changes in gene expression during spermatogenesis. Notably, our findings indicate that meiosis initiates relatively early in chickens, with the formation of the blood-testis barrier being closely associated with pachytene spermatocytes. Additionally, the testicular microenvironment undergoes age-related adaptive changes. Furthermore, we observed that support cells at 20 and 80 weeks of age exhibit similar transcriptional profiles, while macrophages and T cells play a pivotal role in the formation of the testicular cords and vascular networks during the early developmental stages. Conclusion This study offers a comprehensive atlas of testicular development in chickens, elucidating the sequential cell fate transitions from spermatogonial stem cells to mature sperm, alongside the dynamic and intricate developmental trajectories of somatic cells within the testicular microenvironment. These findings present novel insights into avian testicular development and establish a theoretical foundation for future research in reproductive biology and breeding strategies.
format Article
id doaj-art-2676da13573b485c8ed36ca0b5c1d61f
institution Kabale University
issn 1471-2164
language English
publishDate 2025-08-01
publisher BMC
record_format Article
series BMC Genomics
spelling doaj-art-2676da13573b485c8ed36ca0b5c1d61f2025-08-20T04:01:47ZengBMCBMC Genomics1471-21642025-08-0126112110.1186/s12864-025-11944-9Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesisHaishan Guo0Jianing Liu1Mingzhen Xu2Tingqi Zhu3Shuangxing Liu4Pingquan Liu5Huayuan Liu6Shi Tang7Zhunan Li8Weiwei Jin9Donghua Li10Yadong Tian11Xiangtao Kang12Guirong Sun13The Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityKey Laboratory of Livestock and Poultry Resources (Poultry) Evaluation and Utilization of Ministry of Agriculture and Rural Affairs, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityThe Shennong Laboratory, Henan Agricultural UniversityAbstract Background Spermatogenesis is a pivotal biological process for the precise transmission of paternal genetic information, governed by a highly complex and dynamically regulated testicular microenvironment. Although mammalian research has characterized germ cell development at the single-cell level, differences in reproductive strategies limit the relevance of these findings to avian species. Results We employed single-cell RNA sequencing (scRNA-seq) to analyze the testes of the “Yufen 1” H line roosters at five distinct developmental stages: birth, rapid testicular development, sexual maturity, physical maturity, and senescence. By constructing a single-cell transcriptomic atlas, we identified ten somatic cell subtypes and four germ cell subtypes, thereby elucidating the dynamic changes in gene expression during spermatogenesis. Notably, our findings indicate that meiosis initiates relatively early in chickens, with the formation of the blood-testis barrier being closely associated with pachytene spermatocytes. Additionally, the testicular microenvironment undergoes age-related adaptive changes. Furthermore, we observed that support cells at 20 and 80 weeks of age exhibit similar transcriptional profiles, while macrophages and T cells play a pivotal role in the formation of the testicular cords and vascular networks during the early developmental stages. Conclusion This study offers a comprehensive atlas of testicular development in chickens, elucidating the sequential cell fate transitions from spermatogonial stem cells to mature sperm, alongside the dynamic and intricate developmental trajectories of somatic cells within the testicular microenvironment. These findings present novel insights into avian testicular development and establish a theoretical foundation for future research in reproductive biology and breeding strategies.https://doi.org/10.1186/s12864-025-11944-9Single cell transcriptomeChickenTestisSpermatogenesis
spellingShingle Haishan Guo
Jianing Liu
Mingzhen Xu
Tingqi Zhu
Shuangxing Liu
Pingquan Liu
Huayuan Liu
Shi Tang
Zhunan Li
Weiwei Jin
Donghua Li
Yadong Tian
Xiangtao Kang
Guirong Sun
Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
BMC Genomics
Single cell transcriptome
Chicken
Testis
Spermatogenesis
title Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
title_full Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
title_fullStr Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
title_full_unstemmed Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
title_short Single-cell RNA sequencing uncovers dynamic roadmap during chicken spermatogenesis
title_sort single cell rna sequencing uncovers dynamic roadmap during chicken spermatogenesis
topic Single cell transcriptome
Chicken
Testis
Spermatogenesis
url https://doi.org/10.1186/s12864-025-11944-9
work_keys_str_mv AT haishanguo singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT jianingliu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT mingzhenxu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT tingqizhu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT shuangxingliu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT pingquanliu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT huayuanliu singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT shitang singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT zhunanli singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT weiweijin singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT donghuali singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT yadongtian singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT xiangtaokang singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis
AT guirongsun singlecellrnasequencinguncoversdynamicroadmapduringchickenspermatogenesis