The hidden role of heterotrophic bacteria in early carbonate diagenesis

Abstract Microbial impacts on early carbonate diagenesis, particularly the formation of Mg-carbonates at low temperatures, have long eluded scientists. Our breakthrough laboratory experiments with two species of halophilic aerobic bacteria and marine carbonate grains reveal that these bacteria creat...

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Main Authors: Mónica Sánchez-Román, Viswasanthi Chandra, Sebastian Mulder, Camila Areias, John Reijmer, Volker Vahrenkamp
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-024-84407-y
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author Mónica Sánchez-Román
Viswasanthi Chandra
Sebastian Mulder
Camila Areias
John Reijmer
Volker Vahrenkamp
author_facet Mónica Sánchez-Román
Viswasanthi Chandra
Sebastian Mulder
Camila Areias
John Reijmer
Volker Vahrenkamp
author_sort Mónica Sánchez-Román
collection DOAJ
description Abstract Microbial impacts on early carbonate diagenesis, particularly the formation of Mg-carbonates at low temperatures, have long eluded scientists. Our breakthrough laboratory experiments with two species of halophilic aerobic bacteria and marine carbonate grains reveal that these bacteria created a distinctive protodolomite (disordered dolomite) rim around the grains. Scanning Electron Microscopy (SEM) and X-ray Diffraction (XRD) confirmed the protodolomite formation, while solid-state nuclear magnetic resonance (NMR) revealed bacterial interactions with carboxylated organic matter, such as extracellular polymeric substances (EPS). We observed a significant carbon isotope fractionation (average δ13C = 11.3‰) and notable changes in Mg/Ca ratios throughout the experiments. Initial medium δ13C was − 18‰, sterile sediments were at 2‰ (n = 12), bacterial-altered sediments were − 6.8‰ (n = 12), and final medium δ13C was − 4.7‰. These results highlight the role of bacteria in driving organic carbon sequestration into Mg-rich carbonates and demonstrate the utility of NMR as a tool for detecting microbial biosignatures. This has significant implications for understanding carbonate diagenesis (dissolution and reprecipitation), climate science, and extraterrestrial research.
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institution Kabale University
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spelling doaj-art-1b39289ba95c485faad7f16938e666212025-01-05T12:14:41ZengNature PortfolioScientific Reports2045-23222025-01-0115111410.1038/s41598-024-84407-yThe hidden role of heterotrophic bacteria in early carbonate diagenesisMónica Sánchez-Román0Viswasanthi Chandra1Sebastian Mulder2Camila Areias3John Reijmer4Volker Vahrenkamp5Geobiology Laboratory, Earth Sciences Department, Faculty of Science, Vrije UniversiteitAli I. Al-Naimi Petroleum Engineering Research Center, King Abdullah University of Science and TechnologyGeobiology Laboratory, Earth Sciences Department, Faculty of Science, Vrije UniversiteitGeobiology Laboratory, Earth Sciences Department, Faculty of Science, Vrije UniversiteitGeobiology Laboratory, Earth Sciences Department, Faculty of Science, Vrije UniversiteitAli I. Al-Naimi Petroleum Engineering Research Center, King Abdullah University of Science and TechnologyAbstract Microbial impacts on early carbonate diagenesis, particularly the formation of Mg-carbonates at low temperatures, have long eluded scientists. Our breakthrough laboratory experiments with two species of halophilic aerobic bacteria and marine carbonate grains reveal that these bacteria created a distinctive protodolomite (disordered dolomite) rim around the grains. Scanning Electron Microscopy (SEM) and X-ray Diffraction (XRD) confirmed the protodolomite formation, while solid-state nuclear magnetic resonance (NMR) revealed bacterial interactions with carboxylated organic matter, such as extracellular polymeric substances (EPS). We observed a significant carbon isotope fractionation (average δ13C = 11.3‰) and notable changes in Mg/Ca ratios throughout the experiments. Initial medium δ13C was − 18‰, sterile sediments were at 2‰ (n = 12), bacterial-altered sediments were − 6.8‰ (n = 12), and final medium δ13C was − 4.7‰. These results highlight the role of bacteria in driving organic carbon sequestration into Mg-rich carbonates and demonstrate the utility of NMR as a tool for detecting microbial biosignatures. This has significant implications for understanding carbonate diagenesis (dissolution and reprecipitation), climate science, and extraterrestrial research.https://doi.org/10.1038/s41598-024-84407-y
spellingShingle Mónica Sánchez-Román
Viswasanthi Chandra
Sebastian Mulder
Camila Areias
John Reijmer
Volker Vahrenkamp
The hidden role of heterotrophic bacteria in early carbonate diagenesis
Scientific Reports
title The hidden role of heterotrophic bacteria in early carbonate diagenesis
title_full The hidden role of heterotrophic bacteria in early carbonate diagenesis
title_fullStr The hidden role of heterotrophic bacteria in early carbonate diagenesis
title_full_unstemmed The hidden role of heterotrophic bacteria in early carbonate diagenesis
title_short The hidden role of heterotrophic bacteria in early carbonate diagenesis
title_sort hidden role of heterotrophic bacteria in early carbonate diagenesis
url https://doi.org/10.1038/s41598-024-84407-y
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