Extending gene set variation analysis with a reference dataset to stabilize scores

Abstract Background Biological pathways are sets of genes that jointly drive biological processes. Rather than analyzing genes individually, it is common practice to summarize sets of related genes using gene set variation analysis (GSVA). In short, GSVA summarizes a set of genes into a single score...

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Main Authors: Lorin Towle-Miller, William Jordan, Alexandre Lockhart, Johannes Freudenburg, Aman Virmani, Mandy Bergquist, Jeffrey Miecznikowski, Will Powley
Format: Article
Language:English
Published: BMC 2025-07-01
Series:BMC Genomics
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Online Access:https://doi.org/10.1186/s12864-025-11769-6
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