SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split reads

Abstract Deletions and tandem duplications (commonly called CNVs) represent the majority of structural variations in a human genome. They can be identified using short reads, but because they frequently occur in repetitive regions, existing methods fail to detect most of them. This is because CNVs i...

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Bibliographic Details
Main Authors: Ramesh Rajaby, Wing-Kin Sung
Format: Article
Language:English
Published: Nature Portfolio 2024-12-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-024-53087-7
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