De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI
Mayorella marianaensis (Amoebozoa: Discosea) was the only Mayorella species isolated from deep sea (over 3000 m-depth). We firstly present a transcriptomic analysis of the non-model amoeba species collected from the Mariana Trench area. Illumina sequencing platform was used to generate data which in...
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Elsevier
2025-08-01
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| Series: | Data in Brief |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S235234092500589X |
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| author | Wenli Guo Xiaoli Lei Chen Liang Jianming Chen |
| author_facet | Wenli Guo Xiaoli Lei Chen Liang Jianming Chen |
| author_sort | Wenli Guo |
| collection | DOAJ |
| description | Mayorella marianaensis (Amoebozoa: Discosea) was the only Mayorella species isolated from deep sea (over 3000 m-depth). We firstly present a transcriptomic analysis of the non-model amoeba species collected from the Mariana Trench area. Illumina sequencing platform was used to generate data which including raw data, cleaned reads, de novo assembly, and functional annotation. After assembly, the final transcriptome consists of 57,459,544 transcripts with a mean length of 1646 and N50 length of 1170. The transcriptome has a completeness of 67.4 % as assessed by BUSCO. Functional annotation pathways related to signal transduction, transport and catabolism, and translation are the most annotated in the transcriptome. |
| format | Article |
| id | doaj-art-00d0dcf509ac4b10addb4ab3249ee9dd |
| institution | Kabale University |
| issn | 2352-3409 |
| language | English |
| publishDate | 2025-08-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj-art-00d0dcf509ac4b10addb4ab3249ee9dd2025-08-20T03:57:36ZengElsevierData in Brief2352-34092025-08-016111186410.1016/j.dib.2025.111864De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBIWenli Guo0Xiaoli Lei1Chen Liang2Jianming Chen3College of Oceanography, Fujian Agriculture and Forestry University, 350002 Fuzhou, Fujian, PR China; Fujian Key Laboratory on Conservation and Sustainable Utilization of Marine Biodiversity, Fuzhou Institute of Oceanography, College of Geography and Oceanography, Minjiang University, 350108 Fuzhou, PR ChinaCollege of Oceanography, Fujian Agriculture and Forestry University, 350002 Fuzhou, Fujian, PR China; Fujian Key Laboratory on Conservation and Sustainable Utilization of Marine Biodiversity, Fuzhou Institute of Oceanography, College of Geography and Oceanography, Minjiang University, 350108 Fuzhou, PR ChinaFujian Key Laboratory on Conservation and Sustainable Utilization of Marine Biodiversity, Fuzhou Institute of Oceanography, College of Geography and Oceanography, Minjiang University, 350108 Fuzhou, PR China; Technology Innovation Center for Monitoring and Restoration Engineering of Ecological Fragile Zone in Southeast China, Ministry of Natural Resources, 350001 Fujian, PR China; Corresponding author.Fujian Key Laboratory on Conservation and Sustainable Utilization of Marine Biodiversity, Fuzhou Institute of Oceanography, College of Geography and Oceanography, Minjiang University, 350108 Fuzhou, PR China; Technology Innovation Center for Monitoring and Restoration Engineering of Ecological Fragile Zone in Southeast China, Ministry of Natural Resources, 350001 Fujian, PR ChinaMayorella marianaensis (Amoebozoa: Discosea) was the only Mayorella species isolated from deep sea (over 3000 m-depth). We firstly present a transcriptomic analysis of the non-model amoeba species collected from the Mariana Trench area. Illumina sequencing platform was used to generate data which including raw data, cleaned reads, de novo assembly, and functional annotation. After assembly, the final transcriptome consists of 57,459,544 transcripts with a mean length of 1646 and N50 length of 1170. The transcriptome has a completeness of 67.4 % as assessed by BUSCO. Functional annotation pathways related to signal transduction, transport and catabolism, and translation are the most annotated in the transcriptome.http://www.sciencedirect.com/science/article/pii/S235234092500589XAmoebozoaRNAFunctional annotationMariana trench area |
| spellingShingle | Wenli Guo Xiaoli Lei Chen Liang Jianming Chen De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI Data in Brief Amoebozoa RNA Functional annotation Mariana trench area |
| title | De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI |
| title_full | De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI |
| title_fullStr | De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI |
| title_full_unstemmed | De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI |
| title_short | De novo transcriptome dataset of a Mayorella species isolated from deep seaNCBI |
| title_sort | de novo transcriptome dataset of a mayorella species isolated from deep seancbi |
| topic | Amoebozoa RNA Functional annotation Mariana trench area |
| url | http://www.sciencedirect.com/science/article/pii/S235234092500589X |
| work_keys_str_mv | AT wenliguo denovotranscriptomedatasetofamayorellaspeciesisolatedfromdeepseancbi AT xiaolilei denovotranscriptomedatasetofamayorellaspeciesisolatedfromdeepseancbi AT chenliang denovotranscriptomedatasetofamayorellaspeciesisolatedfromdeepseancbi AT jianmingchen denovotranscriptomedatasetofamayorellaspeciesisolatedfromdeepseancbi |